RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 KCNN1Q92952 543 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 FAM227BQ96M60 508 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 ZFP14Q9HCL3 533 aa6.37□□□□□ -1.39
CXXC4-202ENST00000466963 DDX49Q9Y6V7 483 aaKnown RBP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 RANBP2P49792 3224 aaKnown RBP6.37□□□□□ -1.39
CXXC4-202ENST00000466963 TEX28O15482 410 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 KRT37O76014 449 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 TCF3P15923 654 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 NAPAP54920 295 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 APOBRQ0VD83 1088 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 ELF2Q15723 593 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 SWSAP1Q6NVH7 229 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 FUT10Q6P4F1 479 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 XKR5Q6UX68 686 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 ZNF589Q86UQ0 364 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 CCDC60Q8IWA6 550 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 C4orf19Q8IY42 314 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 SPATA18Q8TC71 538 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 KIF12Q96FN5 646 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 WBP1Q96G27 269 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 KIF2CQ99661 725 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 TTPALQ9BTX7 342 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 TRMT61BQ9BVS5 477 aaKnown RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 DISC1Q9NRI5 854 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 MTRRQ9UBK8 725 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 CA14Q9ULX7 337 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 DOCK5Q9H7D0 1870 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 KIF26AQ9ULI4 1882 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 RPL9P32969 192 aaKnown RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 HNRNPUQ00839 825 aaKnown RBP eCLIP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 SLC14A1Q13336 389 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 ITGB3BPQ13352 177 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 HSP90AA2PQ14568 343 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 KIZQ2M2Z5 673 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 AASDHQ4L235 1098 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 METTL13Q8N6R0 699 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 EXOC6Q8TAG9 804 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 CSGALNACT1Q8TDX6 532 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 TMEM40Q8WWA1 233 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 PRMT7Q9NVM4 692 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 THG1LQ9NWX6 298 aaKnown RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 MSRB2Q9Y3D2 182 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 NUP210Q8TEM1 1887 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 SLC26A4O43511 780 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 ERLIN2O94905 339 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 GATMP50440 423 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 HAND2P61296 217 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 PRKCEQ02156 737 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 NUCB1Q02818 461 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 ZNF268Q14587 947 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 ANKRD45Q5TZF3 282 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 LRSAM1Q6UWE0 723 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 B3GNT9Q6UX72 402 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 MAP4K3Q8IVH8 894 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 MFSD6LQ8IWD5 586 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 REXO1Q8N1G1 1221 aaKnown RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 MAP4K1Q92918 833 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 DUSP9Q99956 384 aaKnown RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 OSBPL7Q9BZF2 842 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 SUCLA2Q9P2R7 463 aaPredicted RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 PIN4Q9Y237 131 aaKnown RBP6.36□□□□□ -1.39
CXXC4-202ENST00000466963 COL4A3BPQ9Y5P4 624 aa6.36□□□□□ -1.39
CXXC4-202ENST00000466963 E7EWF7 191 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 KCNK5O95279 499 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 PSMC3P17980 439 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 FGFR3P22607 806 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 PPP2R5CQ13362 524 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 UBXN2BQ14CS0 331 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 PPP2R5AQ15172 486 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 PFKFB3Q16875 520 aaPredicted RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 CYP4A22Q5TCH4 519 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 USP17L6PQ6QN14 398 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 TPRG1Q6ZUI0 275 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 SLFN12Q8IYM2 578 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 ENGASEQ8NFI3 743 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 FAM3CQ92520 227 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 SMARCD2Q92925 531 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 DHX33Q9H6R0 707 aaKnown RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 MARCH5Q9NX47 278 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 MYBPHLA2RUH7 354 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 PRPF3O43395 683 aaKnown RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 TGM5O43548 720 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 GAS7O60861 476 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 PPFIA3O75145 1194 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 CCNE2O96020 404 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 P4HBP07237 508 aaKnown RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 DRD1P21728 446 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 PABPC1LQ4VXU2 614 aaKnown RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 WWC2Q6AWC2 1192 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 SLC27A1Q6PCB7 646 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 NFXL1Q6ZNB6 911 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 ITIH5Q86UX2 942 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 CHD1LQ86WJ1 897 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 CACTIN-AS1Q8N1I8 211 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 PIP4P2Q8N4L2 257 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 FAM200AQ8TCP9 573 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 COL26A1Q96A83 441 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 CEP89Q96ST8 783 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 TIPINQ9BVW5 301 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms