RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 LEFTY2O00292 366 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 LPXNO60711 386 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 CDC45O75419 566 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 NCR1O76036 304 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 RBP3P10745 1247 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 FBLP22087 321 aaKnown RBP5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 BMPR1AP36894 532 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 ZEB1P37275 1124 aaPredicted RBP5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 NHLH2Q02577 135 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 DDB1Q16531 1140 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 BROXQ5VW32 411 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 CCDC62Q6P9F0 684 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 Q6YL49 198 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 PDZD4Q76G19 769 aaPredicted RBP5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 SLC41A1Q8IVJ1 513 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 LCORLQ8N3X6 602 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 SUPT20HQ8NEM7 779 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 SNX33Q8WV41 574 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 SLC5A5Q92911 643 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 PAWRQ96IZ0 340 aaKnown RBP5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 EMC7Q9NPA0 242 aa5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 NOC2LQ9Y3T9 749 aaKnown RBP5.64□□□□□ -1.51
CHMP2B-202ENST00000466696 ITGA10O75578 1167 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 NDUFA10O95299 355 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 GASTP01350 101 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 HLA-DOAP06340 250 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 SPATA31D3P0C874 917 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 ZSCAN20P17040 1043 aaPredicted RBP5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 AVPR1BP47901 424 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 RNASE9P60153 205 aaKnown RBP5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 TRIM25Q14258 630 aaKnown RBP5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 DALRD3Q5D0E6 543 aaKnown RBP5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 EFCAB12Q6NXP0 572 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 OLFML1Q6UWY5 402 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 SPATA31D4Q6ZUB0 917 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 RASSF3Q86WH2 238 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 OR10H5Q8NGA6 315 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 VOPP1Q96AW1 172 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 WDR11Q9BZH6 1224 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 ANKFY1Q9P2R3 1169 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 CDY2AQ9Y6F7 541 aa5.63□□□□□ -1.51
CHMP2B-202ENST00000466696 TBKBP1A7MCY6 615 aa5.62□□□□□ -1.51
CHMP2B-202ENST00000466696 BEAN1Q3B7T3 259 aa5.62□□□□□ -1.51
CHMP2B-202ENST00000466696 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
CHMP2B-202ENST00000466696 ABHD15Q6UXT9 468 aa5.62□□□□□ -1.51
CHMP2B-202ENST00000466696 SYT12Q8IV01 421 aa5.62□□□□□ -1.51
CHMP2B-202ENST00000466696 GPRC5DQ9NZD1 345 aa5.62□□□□□ -1.51
CHMP2B-202ENST00000466696 POGKQ9P215 609 aa5.62□□□□□ -1.51
CHMP2B-202ENST00000466696 ZMYM3Q14202 1370 aa5.62□□□□□ -1.51
CHMP2B-202ENST00000466696 TMEM127O75204 238 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 CTSSP25774 331 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 LGALS4P56470 323 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 GUCY1B3Q02153 619 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 BMT2Q1RMZ1 405 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 ATP13A4Q4VNC1 1196 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 PITRM1Q5JRX3 1037 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 ANKS6Q68DC2 871 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 BTNL9Q6UXG8 535 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 TFAP2CQ92754 450 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 COQ10AQ96MF6 247 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 KCTD10Q9H3F6 313 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 DKK2Q9UBU2 259 aa5.61□□□□□ -1.51
CHMP2B-202ENST00000466696 RPTORQ8N122 1335 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 CRHR1P34998 444 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 BLOC1S1P78537 153 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 MXRA7P84157 204 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 CSRP2Q16527 193 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 CCDC142Q17RM4 750 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 CPEB3Q8NE35 698 aaKnown RBP5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 ZFP28Q8NHY6 868 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 MDM1Q8TC05 714 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 ZNF480Q8WV37 535 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 PRDM12Q9H4Q4 367 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 SYNPO2LQ9H987 977 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 SYBUQ9NX95 663 aa5.6□□□□□ -1.51
CHMP2B-202ENST00000466696 GSG1L2A8MUP6 293 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 ZNF185O15231 689 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 PHF2O75151 1096 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 LPLP06858 475 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 HKR1P10072 659 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 DDX6P26196 483 aaKnown RBP eCLIP5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 PDCD4Q53EL6 469 aaKnown RBP5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 CT83Q5H943 113 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 ARMC6Q6NXE6 501 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 ADGRG3Q86Y34 549 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 CMTR2Q8IYT2 770 aaKnown RBP5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 CAVIN3Q969G5 261 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 ZNF764Q96H86 408 aaPredicted RBP5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 MRPL42Q9Y6G3 142 aaKnown RBP5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 FPGT-TNNI3KV9GXZ4 949 aa5.59□□□□□ -1.51
CHMP2B-202ENST00000466696 POLR2AP24928 1970 aaKnown RBP5.58□□□□□ -1.52
CHMP2B-202ENST00000466696 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.58□□□□□ -1.52
CHMP2B-202ENST00000466696 PIPSLA2A3N6 862 aa5.58□□□□□ -1.52
CHMP2B-202ENST00000466696 KIAA0355O15063 1070 aa5.58□□□□□ -1.52
CHMP2B-202ENST00000466696 PJA2O43164 708 aa5.58□□□□□ -1.52
CHMP2B-202ENST00000466696 FLT3LGP49771 235 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms