RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SPICE1Q8N0Z3 855 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 SH3TC2Q8TF17 1288 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 MZB1Q8WU39 189 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 RNF34Q969K3 372 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 ERO1AQ96HE7 468 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 C12orf42Q96LP6 360 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 PARK7Q99497 189 aaKnown RBP5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 SRRTQ9BXP5 876 aaKnown RBP5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 KIAA1683Q9H0B3 1180 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 PORCNQ9H237 461 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 RPAP3Q9H6T3 665 aaPredicted RBP5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 AS3MTQ9HBK9 375 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 IL17RBQ9NRM6 502 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 BTBD7Q9P203 1132 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 ARPP21Q9UBL0 812 aaPredicted RBP5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 SWAP70Q9UH65 585 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 PDE4DIPQ5VU43 2346 aa5.7□□□□□ -1.5
EXOSC3-204ENST00000465860 FRMPD3Q5JV73 1810 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 DNAH12Q6ZR08 3092 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 PLXNA1Q9UIW2 1896 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 C19orf81C9J6K1 198 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 CD247P20963 164 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 GUCY2CP25092 1073 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 AFF3P51826 1226 aaKnown RBP5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 HERVK_113P62684 666 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 ICA1Q05084 483 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 PPARAQ07869 468 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 MCMDC2Q4G0Z9 681 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 TTC22Q5TAA0 569 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 CWF19L1Q69YN2 538 aaKnown RBP5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 CWC27Q6UX04 472 aaKnown RBP5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 CATSPERGQ6ZRH7 1159 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 TMEM179Q6ZVK1 233 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 LSRQ86X29 649 aaPredicted RBP5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 TBC1D10CQ8IV04 446 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 IGDCC3Q8IVU1 814 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 NAT16Q8N8M0 369 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 SMCR8Q8TEV9 937 aaPredicted RBP5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 CHMP4CQ96CF2 233 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 CEP95Q96GE4 821 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 NUP88Q99567 741 aaPredicted RBP5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 PAGR1Q9BTK6 254 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 CABP5Q9NP86 173 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 HELLSQ9NRZ9 838 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 GINM1Q9NU53 330 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 FBXO28Q9NVF7 368 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 TMOD4Q9NZQ9 345 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 MORF4L1Q9UBU8 362 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 SRRDQ9UH36 339 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 DDX41Q9UJV9 622 aaKnown RBP5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 GJD2Q9UKL4 321 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 TMX2Q9Y320 296 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 ZNF451Q9Y4E5 1061 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 LCTP09848 1927 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 ALPK3Q96L96 1907 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 CCDC171Q6TFL3 1326 aa5.69□□□□□ -1.5
EXOSC3-204ENST00000465860 MCM3APO60318 1980 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FGF10O15520 208 aaPredicted RBP5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FGRP09769 529 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 GNAT2P19087 354 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 CHMLP26374 656 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FLT3LGP49771 235 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 HAND2P61296 217 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 IRX3P78415 501 aaPredicted RBP5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 PTH1RQ03431 593 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 TMEM62Q0P6H9 643 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 CBX2Q14781 532 aaPredicted RBP5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 ALX1Q15699 326 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 PKN2Q16513 984 aaKnown RBP5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FAM110CQ1W6H9 321 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 HLA-DQA1Q5Y7H0 255 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 RPTNQ6XPR3 784 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 CCDC81Q6ZN84 652 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FAM129CQ86XR2 697 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FIBCD1Q8N539 461 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 ZNF333Q96JL9 665 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FCRL3Q96P31 734 aaPredicted RBP5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FEZ1Q99689 392 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 NAPBQ9H115 298 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 VCPKMTQ9H867 229 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 MTMR4Q9NYA4 1195 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 CLIP2Q9UDT6 1046 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 ANAPC4Q9UJX5 808 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 PCDHA5Q9Y5H7 936 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 FHOD1Q9Y613 1164 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 NEDD4P46934 1319 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 MYPNQ86TC9 1320 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 CEP290O15078 2479 aa5.68□□□□□ -1.5
EXOSC3-204ENST00000465860 PLIN4Q96Q06 1357 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 TNPO2O14787 897 aaKnown RBP5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 ADCY3O60266 1144 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 RECKO95980 971 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 EN2P19622 333 aaPredicted RBP5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 BUD31P41223 144 aaPredicted RBP5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 GCLCP48506 637 aaPredicted RBP5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 RGS19P49795 217 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 USP14P54578 494 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 NCKAP1LP55160 1127 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms