RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CDH16O75309 829 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 TM4SF1P30408 202 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 IL9RQ01113 521 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L24Q0WX57 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L6PQ6QN14 398 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 STXBP4Q6ZWJ1 553 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 CFAP61Q8NHU2 1237 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 PIGOQ8TEQ8 1089 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 STK32AQ8WU08 396 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 UTP4Q969X6 686 aaKnown RBP21.13■□□□□ 0.97
SDF4-205ENST00000465727 NGLY1Q96IV0 654 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 PITPNM3Q9BZ71 974 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 DNAJC18Q9H819 358 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 DMAC2Q9NW81 257 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 CYP39A1Q9NYL5 469 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 STARD13Q9Y3M8 1113 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 TP73O15350 636 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 NEFHP12036 1026 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 CDC25CP30307 473 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 POLGP54098 1239 aaPredicted RBP21.13■□□□□ 0.97
SDF4-205ENST00000465727 RWDD2BP57060 319 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 ARHGAP4P98171 946 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 MESDQ14696 234 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 RBBP5Q15291 538 aaKnown RBP21.13■□□□□ 0.97
SDF4-205ENST00000465727 ARHGAP44Q17R89 818 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 SPDYAQ5MJ70 313 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 ENDOVQ8N8Q3 282 aaKnown RBP21.13■□□□□ 0.97
SDF4-205ENST00000465727 ANKLE1Q8NAG6 615 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 SNF8Q96H20 258 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 SETDB2Q96T68 719 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 SEL1LQ9UBV2 794 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 GAKO14976 1311 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 TMEM110-MUSTN1A8MSY1 372 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 FOXN3O00409 490 aaPredicted RBP21.12■□□□□ 0.97
SDF4-205ENST00000465727 FAM13AO94988 1023 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 GH1P01241 217 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 GZMAP12544 262 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 AKR1B1P15121 316 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 RASSF2P50749 326 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 KRT17Q04695 432 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 MPP2Q14168 576 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 PRR16Q569H4 304 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 TTBK2Q6IQ55 1244 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 ANKRD35Q8N283 1001 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 UIMC1Q96RL1 719 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 USH1CQ9Y6N9 552 aa21.12■□□□□ 0.97
SDF4-205ENST00000465727 TCRBV7S2A1N4TA0A589 114 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 KLHL33A6NCF5 533 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 MAGEB2O15479 319 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 TAC1P20366 129 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 ATP4AP20648 1035 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 ATP6V1C1P21283 382 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 PHLDB3Q6NSJ2 640 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 DPP8Q6V1X1 898 aaPredicted RBP21.11■□□□□ 0.97
SDF4-205ENST00000465727 TPTE2Q6XPS3 522 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 RIBC1Q8N443 379 aaPredicted RBP21.11■□□□□ 0.97
SDF4-205ENST00000465727 CCDC77Q9BR77 488 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 ARHGEF10LQ9HCE6 1279 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 ANKRD33BA6NCL7 494 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 FSCN2O14926 492 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 SPOPO43791 374 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 PEX11AO75192 247 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 DCTN3O75935 186 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 KCNJ1P48048 391 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 EIF6P56537 245 aaKnown RBP21.11■□□□□ 0.97
SDF4-205ENST00000465727 LBRQ14739 615 aaKnown RBP21.11■□□□□ 0.97
SDF4-205ENST00000465727 SGSM1Q2NKQ1 1148 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 WASHC2DQ5SRD0 308 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 RINT1Q6NUQ1 792 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 VSIG1Q86XK7 387 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 GRK7Q8WTQ7 553 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 MAIP1Q8WWC4 291 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 YIPF3Q9GZM5 350 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 MLXIPLQ9NP71 852 aa21.11■□□□□ 0.97
SDF4-205ENST00000465727 THAP12O43422 761 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 TPBGLP0DKB5 382 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 SLC16A2P36021 539 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 CETN1Q12798 172 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 BFSP1Q12934 665 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 PTK6Q13882 451 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.1■□□□□ 0.979e-7■■■■■ 51.2
SDF4-205ENST00000465727 SPDYE1Q8NFV5 336 aaPredicted RBP21.1■□□□□ 0.97
SDF4-205ENST00000465727 SLC20A1Q8WUM9 679 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 CRAMP1Q96RY5 1269 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 FAM167BQ9BTA0 163 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 ASIC3Q9UHC3 531 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 PCDHA1Q9Y5I3 950 aa21.1■□□□□ 0.97
SDF4-205ENST00000465727 LRRD1A4D1F6 860 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 EME2A4GXA9 379 aaPredicted RBP21.09■□□□□ 0.97
SDF4-205ENST00000465727 MAPK13O15264 365 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 LRRN2O75325 713 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 ACADSP16219 412 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 CTCFP49711 727 aaPredicted RBP21.09■□□□□ 0.97
SDF4-205ENST00000465727 NR1H3Q13133 447 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 MYBPC2Q14324 1141 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 STAT4Q14765 748 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 RGS9BPQ6ZS82 235 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 RELL1Q8IUW5 271 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 SLC9A9Q8IVB4 645 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 RPUSD2Q8IZ73 545 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms