RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 ASAP3Q8TDY4 903 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 CASP10Q92851 521 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 LPPQ93052 612 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 PGBD4Q96DM1 585 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 RPGRIP1Q96KN7 1286 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 MFSD14AQ96MC6 490 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
COL7A1-205ENST00000465238 GPRC5CQ9NQ84 441 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 BLOC1S4Q9NUP1 217 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 STK17AQ9UEE5 414 aa19.55■□□□□ 0.72
COL7A1-205ENST00000465238 NT5C1B-RDH14C9J2C7 533 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 GLRA2P23416 452 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 STAT6P42226 847 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 SLC12A3P55017 1021 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 MCM6Q14566 821 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 C1orf186Q6ZWK4 172 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 PDILTQ8N807 584 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 LARP4BQ92615 738 aaKnown RBP19.54■□□□□ 0.72
COL7A1-205ENST00000465238 KIFAP3Q92845 792 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 RUSC1Q9BVN2 902 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 TIPINQ9BVW5 301 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 TBC1D13Q9NVG8 400 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 KCND2Q9NZV8 630 aa19.54■□□□□ 0.72
COL7A1-205ENST00000465238 WDFY4Q6ZS81 3184 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 OFD1O75665 1012 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 RNASELQ05823 741 aaKnown RBP19.53■□□□□ 0.72
COL7A1-205ENST00000465238 POU5F1BQ06416 359 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 LONRF3Q496Y0 759 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 TPRNQ4KMQ1 711 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 TRIM67Q6ZTA4 783 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 BMP8AQ7Z5Y6 402 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 GPBP1Q86WP2 473 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 VPS52Q8N1B4 723 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 IFT74Q96LB3 600 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 NRDE2Q9H7Z3 1164 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 POLD4Q9HCU8 107 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 INPP5FQ9Y2H2 1132 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 PCDHB2Q9Y5E7 798 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 HCFC2Q9Y5Z7 792 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 MYH11P35749 1972 aa19.53■□□□□ 0.72
COL7A1-205ENST00000465238 MEIS3P2A8K0S8 358 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 HIP1RO75146 1068 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 CXCL14O95715 111 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 KRT18P05783 430 aaKnown RBP19.52■□□□□ 0.72
COL7A1-205ENST00000465238 GUCY2CP25092 1073 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 ZXDAP98168 799 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 CAPSQ13938 189 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 GIT2Q14161 759 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 PPP2R5AQ15172 486 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 RESP18Q5W5W9 173 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 ADALQ6DHV7 355 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 SV2BQ7L1I2 683 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 MRPL10Q7Z7H8 261 aaKnown RBP19.52■□□□□ 0.72
COL7A1-205ENST00000465238 DDX53Q86TM3 631 aaKnown RBP19.52■□□□□ 0.72
COL7A1-205ENST00000465238 URGCPQ8TCY9 931 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 LRRC15Q8TF66 581 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 IGSF21Q96ID5 467 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 DRC1Q96MC2 740 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 ZBP1Q9H171 429 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 GDPD2Q9HCC8 539 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 IRAK3Q9Y616 596 aa19.52■□□□□ 0.72
COL7A1-205ENST00000465238 CNTNAP2Q9UHC6 1331 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 LRRIQ4A6NIV6 560 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 CLASP2O75122 1294 aaKnown RBP19.51■□□□□ 0.71
COL7A1-205ENST00000465238 GALTP07902 379 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 CA8P35219 290 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 PTENP60484 403 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 ITIH3Q06033 890 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 RAD51AP2Q09MP3 1159 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 PCBP1Q15365 356 aaKnown RBP eCLIP19.51■□□□□ 0.71
COL7A1-205ENST00000465238 CES5AQ6NT32 575 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 TMEM173Q86WV6 379 aaPredicted RBP19.51■□□□□ 0.71
COL7A1-205ENST00000465238 IQUBQ8NA54 791 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 TMEM87AQ8NBN3 555 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 APOL5Q9BWW9 433 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 MINDY3Q9H8M7 445 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 STK39Q9UEW8 545 aa19.51■□□□□ 0.71
COL7A1-205ENST00000465238 A0A087X0B3 334 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.5■□□□□ 0.71
COL7A1-205ENST00000465238 TMEM221A6NGB7 291 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 M0R296 226 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 CTSAP10619 480 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 CMA1P23946 247 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 HOXA11P31270 313 aaPredicted RBP19.5■□□□□ 0.71
COL7A1-205ENST00000465238 NAMPTP43490 491 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 ARSHQ5FYA8 562 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 AGMOQ6ZNB7 445 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 ZBTB8OSQ8IWT0 167 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 DEPTORQ8TB45 409 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 DHX58Q96C10 678 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 NECTIN4Q96NY8 510 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 PYM1Q9BRP8 204 aaKnown RBP19.5■□□□□ 0.71
COL7A1-205ENST00000465238 GBP3Q9H0R5 595 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 ADAM7Q9H2U9 754 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 RSAD1Q9HA92 442 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 KANSL3Q9P2N6 904 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 KCNG1Q9UIX4 513 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 ZDBF2Q9HCK1 2354 aa19.5■□□□□ 0.71
COL7A1-205ENST00000465238 NPHP3-ACAD11A0A0J9YXS1 232 aa19.49■□□□□ 0.71
COL7A1-205ENST00000465238 GOLGA6L4A6NEF3 574 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms