RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 COX11Q9Y6N1 276 aa6.26□□□□□ -1.41
UBR4-209ENST00000465036 RAPGEF2Q9Y4G8 1499 aa6.26□□□□□ -1.41
UBR4-209ENST00000465036 ST20-MTHFSA0A0A6YYL1 179 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 PPP1R12AO14974 1030 aaPredicted RBP6.25□□□□□ -1.41
UBR4-209ENST00000465036 GAS7O60861 476 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 APOBEC3AP31941 199 aaPredicted RBP6.25□□□□□ -1.41
UBR4-209ENST00000465036 AVPR1BP47901 424 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 C21orf58P58505 322 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 PHC1P78364 1004 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 FAM189BP81408 668 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 DUSP2Q05923 314 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.41
UBR4-209ENST00000465036 PLXDC1Q8IUK5 500 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 FAM9AQ8IZU1 332 aaPredicted RBP6.25□□□□□ -1.41
UBR4-209ENST00000465036 GAB3Q8WWW8 586 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 ZNF496Q96IT1 587 aaPredicted RBP6.25□□□□□ -1.41
UBR4-209ENST00000465036 AKIP1Q9NQ31 210 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 TMEM260Q9NX78 707 aa6.25□□□□□ -1.41
UBR4-209ENST00000465036 H2AFY2Q9P0M6 372 aaPredicted RBP6.25□□□□□ -1.41
UBR4-209ENST00000465036 PRXQ9BXM0 1461 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 HSP90B1P14625 803 aaKnown RBP6.24□□□□□ -1.41
UBR4-209ENST00000465036 ZSCAN20P17040 1043 aaPredicted RBP6.24□□□□□ -1.41
UBR4-209ENST00000465036 XPAP23025 273 aaPredicted RBP6.24□□□□□ -1.41
UBR4-209ENST00000465036 CD38P28907 300 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 IL12RB1P42701 662 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 PTTG1IPP53801 180 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 NRG3P56975 720 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 BLOC1S1P78537 153 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 BEAN1Q3B7T3 259 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 COLEC12Q5KU26 742 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 CCDC62Q6P9F0 684 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 SUPT20HQ8NEM7 779 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 LINC00476Q8WZB0 136 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 TRPM5Q9NZQ8 1165 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 NUMBLQ9Y6R0 609 aa6.24□□□□□ -1.41
UBR4-209ENST00000465036 TTBK1Q5TCY1 1321 aaPredicted RBP6.24□□□□□ -1.41
UBR4-209ENST00000465036 PRR5-ARHGAP8B1AHC4 643 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 MASP2O00187 686 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 TGM5O43548 720 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 LPXNO60711 386 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 CLK3P49761 638 aaKnown RBP6.23□□□□□ -1.41
UBR4-209ENST00000465036 MEF2AQ02078 507 aaPredicted RBP6.23□□□□□ -1.41
UBR4-209ENST00000465036 C19orf54Q5BKX5 351 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 ZBTB41Q5SVQ8 909 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 MSL3Q8N5Y2 521 aaKnown RBP6.23□□□□□ -1.41
UBR4-209ENST00000465036 ZNF610Q8N9Z0 462 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 FERMT2Q96AC1 680 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 WDR11Q9BZH6 1224 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 MSRAQ9UJ68 235 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 IQGAP2Q13576 1575 aa6.23□□□□□ -1.41
UBR4-209ENST00000465036 DISP1Q96F81 1524 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 B5MCH6 92 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 KIAA0355O15063 1070 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 NCR1O76036 304 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 LMO1P25800 156 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 MGAT1P26572 445 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 LMBR1LQ6UX01 489 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 GLB1L2Q8IW92 636 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 LCORLQ8N3X6 602 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 SH3TC2Q8TF17 1288 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 MTFR1LQ9H019 292 aa6.22□□□□□ -1.41
UBR4-209ENST00000465036 EPN1Q9Y6I3 576 aaPredicted RBP6.22□□□□□ -1.41
UBR4-209ENST00000465036 PIPSLA2A3N6 862 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 LEFTY2O00292 366 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 ASMTLO95671 621 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 LTA4HP09960 611 aaKnown RBP6.21□□□□□ -1.42
UBR4-209ENST00000465036 HKR1P10072 659 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 TYRP1P17643 537 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 BTNL9Q6UXG8 535 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 CHTF18Q8WVB6 975 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 WDR26Q9H7D7 661 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 ADARB2Q9NS39 739 aaKnown RBP6.21□□□□□ -1.42
UBR4-209ENST00000465036 ANKFY1Q9P2R3 1169 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 TMPRSS11EQ9UL52 423 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 USP18Q9UMW8 372 aa6.21□□□□□ -1.42
UBR4-209ENST00000465036 FAM83GA6ND36 823 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 GASTP01350 101 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 HLA-DOAP06340 250 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 RBP3P10745 1247 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 LSP1P33241 339 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 OCRLQ01968 901 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 APBA1Q02410 837 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 NHLH2Q02577 135 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 UBE3CQ15386 1083 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 CSRP2Q16527 193 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 PRR16Q569H4 304 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 ABHD17BQ5VST6 288 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 ARMC6Q6NXE6 501 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 SYT12Q8IV01 421 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 SLC41A1Q8IVJ1 513 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 UGGT2Q9NYU1 1516 aa6.2□□□□□ -1.42
UBR4-209ENST00000465036 COL11A2P13942 1736 aaPredicted RBP6.19□□□□□ -1.42
UBR4-209ENST00000465036 PTPRGP23470 1445 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 ADCY10Q96PN6 1610 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 PRSS38A1L453 326 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 MARCH11A6NNE9 402 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 TBKBP1A7MCY6 615 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 ZNF891A8MT65 544 aaPredicted RBP6.19□□□□□ -1.42
UBR4-209ENST00000465036 NDUFA10O95299 355 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms