RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 LRRC42Q9Y546 428 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L15C9J2P7 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L13C9JLJ4 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L11C9JVI0 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L18D6R9N7 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L22D6RA61 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L17D6RBQ6 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L19D6RCP7 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L20D6RJB6 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 FSCN2O14926 492 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 TP73O15350 636 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 P4HA2O15460 535 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 MAGEB2O15479 319 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 HIP1RO75146 1068 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 SKAP2O75563 359 aaPredicted RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 TTC4O95801 387 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 PYGMP11217 842 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 GZMAP12544 262 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 BRAFP15056 766 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 STX2P32856 288 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 ABL2P42684 1182 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 MGAT5Q09328 741 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 KCNA1Q09470 495 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L24Q0WX57 530 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 PTK6Q13882 451 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 TAF11Q15544 211 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 QRICH1Q2TAL8 776 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 PRR16Q569H4 304 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 RINT1Q6NUQ1 792 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 USP17L6PQ6QN14 398 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 RNF207Q6ZRF8 634 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 INTS8Q75QN2 995 aaKnown RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 HS2ST1Q7LGA3 356 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 CCDC25Q86WR0 208 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 ECHDC2Q86YB7 292 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 ANKRD42Q8N9B4 389 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 MARCH10Q8NA82 808 aaPredicted RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 ANKLE1Q8NAG6 615 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 LMO3Q8TAP4 145 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 MICAL1Q8TDZ2 1067 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 SLC20A1Q8WUM9 679 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 SNF8Q96H20 258 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 NAF1Q96HR8 494 aaKnown RBP7.82□□□□□ -1.16
USP48-206ENST00000464577 DNAJC18Q9H819 358 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 RNPEPL1Q9HAU8 725 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 CD209Q9NNX6 404 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 NKIRAS1Q9NYS0 192 aa7.82□□□□□ -1.16
USP48-206ENST00000464577 TCRBV7S2A1N4TA0A589 114 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 TMEM110-MUSTN1A8MSY1 372 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 UBAP1LF5GYI3 381 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 FOXN3O00409 490 aaPredicted RBP7.81□□□□□ -1.16
USP48-206ENST00000464577 MEIS2O14770 477 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 AHCYL1O43865 530 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 SORBS3O60504 671 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 ACSL3O95573 720 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 FOSP01100 380 aaPredicted RBP7.81□□□□□ -1.16
USP48-206ENST00000464577 CYP1A2P05177 515 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 CREB1P16220 341 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 TAC1P20366 129 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 CALB2P22676 271 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 SLC16A2P36021 539 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 SREBF1P36956 1147 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 POLGP54098 1239 aaPredicted RBP7.81□□□□□ -1.16
USP48-206ENST00000464577 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
USP48-206ENST00000464577 RWDD2BP57060 319 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 KRT17Q04695 432 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 BFSP1Q12934 665 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 MPP2Q14168 576 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 MESDQ14696 234 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 ARHGAP44Q17R89 818 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 PHLDB3Q6NSJ2 640 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 RGS9BPQ6ZS82 235 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 OTUD6AQ7L8S5 288 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 RELL1Q8IUW5 271 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 RIBC1Q8N443 379 aaPredicted RBP7.81□□□□□ -1.16
USP48-206ENST00000464577 ENDOVQ8N8Q3 282 aaKnown RBP7.81□□□□□ -1.16
USP48-206ENST00000464577 MAIP1Q8WWC4 291 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 UTP4Q969X6 686 aaKnown RBP7.81□□□□□ -1.16
USP48-206ENST00000464577 PLVAPQ9BX97 442 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 OSBPL1AQ9BXW6 950 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 KIF9Q9HAQ2 790 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 PARVGQ9HBI0 331 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 ETNK1Q9HBU6 452 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 TUFT1Q9NNX1 390 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 KCNK9Q9NPC2 374 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 AGPAT3Q9NRZ7 376 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 CYP39A1Q9NYL5 469 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 UVRAGQ9P2Y5 699 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 TRIM33Q9UPN9 1127 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 USP20Q9Y2K6 914 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 STARD13Q9Y3M8 1113 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 PCDHA1Q9Y5I3 950 aa7.81□□□□□ -1.16
USP48-206ENST00000464577 SPOPO43791 374 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 PEX11AO75192 247 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 CDH16O75309 829 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 FESP07332 822 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 LINGO3P0C6S8 592 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 TRIM49P0CI25 452 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 TRIM49CP0CI26 452 aa7.8□□□□□ -1.16
USP48-206ENST00000464577 MUTP22033 750 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms