RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 GRM3Q14832 879 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 RNF151Q2KHN1 245 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 PPP4R4Q6NUP7 873 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 PDZD4Q76G19 769 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 RSPH3Q86UC2 560 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 LGI4Q8N135 537 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 PQLC1Q8N2U9 271 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 ZBTB34Q8NCN2 500 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 KAT5Q92993 513 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 TTC17Q96AE7 1141 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 RGMAQ96B86 450 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 CYFIP2Q96F07 1278 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 ACO2Q99798 780 aaKnown RBP4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 MSL2Q9HCI7 577 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 USP40Q9NVE5 1235 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 TRPS1Q9UHF7 1281 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 PUF60Q9UHX1 559 aaKnown RBP4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 PCDHA13Q9Y5I0 950 aa4.7□□□□□ -1.66
HMGXB4-205ENST00000464480 B4GALT3O60512 393 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 B4GALT4O60513 344 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 FTLP02792 175 aaPredicted RBP4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 SREBF1P36956 1147 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 FXR1P51114 621 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 RAC3P60763 192 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 PURAQ00577 322 aaKnown RBP4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 SURF1Q15526 300 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 TBR1Q16650 682 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 CCDC157Q569K6 752 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 NT5DC1Q5TFE4 455 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 ARHGEF18Q6ZSZ5 1173 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 Q6ZVL8 140 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 SRGAP1Q7Z6B7 1085 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 ZDHHC14Q8IZN3 488 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 CCHCR1Q8TD31 782 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 NSUN6Q8TEA1 469 aaKnown RBP4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 RABGGTAQ92696 567 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 RPL10LQ96L21 214 aaKnown RBP4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 SENP6Q9GZR1 1112 aaPredicted RBP4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 MAN1C1Q9NR34 630 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 TMEM140Q9NV12 185 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 NCDNQ9UBB6 729 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 DDX20Q9UHI6 824 aaKnown RBP4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 POLHQ9Y253 713 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 STXBP5LQ9Y2K9 1186 aa4.69□□□□□ -1.66
HMGXB4-205ENST00000464480 PMS2P1A4D2B8 440 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 SLC26A4O43511 780 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 NOBOXO60393 691 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 GPR32O75388 356 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 TUSC2O75896 110 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 UBXN7O94888 489 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 ARIH2O95376 493 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 IL2RBP14784 551 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 PTPN7P35236 360 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 SLC6A9P48067 706 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 NPEPPSP55786 919 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 ADAM8P78325 824 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 RAB39AQ14964 217 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 KSR2Q6VAB6 950 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 GADL1Q6ZQY3 521 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 LRRC56Q8IYG6 542 aaPredicted RBP4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 TRMT2AQ8IZ69 625 aaKnown RBP4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 CMTM4Q8IZR5 234 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 C3orf20Q8ND61 904 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 OR5M3Q8NGP4 307 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 CASKIN2Q8WXE0 1202 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 TIFAQ96CG3 184 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 CDK5RAP3Q96JB5 506 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 TMX3Q96JJ7 454 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 CLPTM1LQ96KA5 538 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 CGRRF1Q99675 332 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 PDCD2LQ9BRP1 358 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 TMEM60Q9H2L4 133 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 ARNT2Q9HBZ2 717 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 IL23AQ9NPF7 189 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 MOCS1Q9NZB8 636 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 SIK3Q9Y2K2 1263 aa4.68□□□□□ -1.66
HMGXB4-205ENST00000464480 TEX33O43247 280 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 ADCY6O43306 1168 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 B3GALT2O43825 422 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 ALDH2P05091 517 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 MYBP10242 640 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 GUCY1A2P33402 732 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 GZMKP49863 264 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 DSC2Q02487 901 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 SP140Q13342 867 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 RIN1Q13671 783 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 ATP2B3Q16720 1220 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 PRAMEF14Q5SWL7 426 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 CHST15Q7LFX5 561 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 OVCH2Q7RTZ1 564 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 DAAM2Q86T65 1068 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 SIAH1Q8IUQ4 282 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 LILRA3Q8N6C8 439 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 SHCBP1Q8NEM2 672 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 PPP1R35Q8TAP8 253 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 CFHR4Q92496 578 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 RAB24Q969Q5 203 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 MTFMTQ96DP5 389 aaKnown RBP4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 IL17RAQ96F46 866 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 FAM167AQ96KS9 214 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms