RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SEZ6LQ9BYH1 1024 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 STK33Q9BYT3 514 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 HACD3Q9P035 362 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 C6orf203Q9P0P8 240 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 DUSP10Q9Y6W6 482 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 TLDC2A0PJX2 215 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SRRM3A6NNA2 597 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 NOTOA8MTQ0 251 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 M0R2N6 131 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 WDR46O15213 610 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SERPINB7O75635 380 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 NDUFA10O95299 355 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ZIC2O95409 532 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 STAMBPO95630 424 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 GYPCP04921 128 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 CYP1A2P05177 515 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 LYNP07948 512 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 CHN1P15882 459 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 GM2AP17900 193 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 RCVRNP35243 200 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 KRT9P35527 623 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 KPNA1P52294 538 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 CSE1LP55060 971 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 FKBP4Q02790 459 aaKnown RBP eCLIP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 TOB2Q14106 344 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SEPT6Q14141 434 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ELOAQ14241 798 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ZCWPW2Q504Y3 356 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 WDR45BQ5MNZ6 344 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SNX30Q5VWJ9 437 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PAPD7Q5XG87 772 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 KLHL35Q6PF15 583 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 DHX32Q7L7V1 743 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 HS2ST1Q7LGA3 356 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF804AQ7Z570 1209 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SATL1Q86VE3 508 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 RNF135Q8IUD6 432 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SCAIQ8N9R8 606 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 STKLD1Q8NE28 680 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ATP8B4Q8TF62 1192 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 CASKIN2Q8WXE0 1202 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 MAML3Q96JK9 1138 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PPP1R10Q96QC0 940 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 HAPLN3Q96S86 360 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SMC6Q96SB8 1091 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 NAP1L3Q99457 506 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 FAM129AQ9BZQ8 928 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 KRT23Q9C075 422 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 NSRP1Q9H0G5 558 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 GBA3Q9H227 469 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 MRPL46Q9H2W6 279 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SLC12A5Q9H2X9 1139 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 NRDE2Q9H7Z3 1164 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ARHGEF3Q9NR81 526 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 MBIPQ9NS73 344 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 RBM12Q9NTZ6 932 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ABHD10Q9NUJ1 306 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SUGT1Q9Y2Z0 365 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PCDHA5Q9Y5H7 936 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 FADS3Q9Y5Q0 445 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 EPN1Q9Y6I3 576 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ZMYM6O95789 1325 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 NEDD4P46934 1319 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 KMT2EQ8IZD2 1858 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PTPDC1A2A3K4 754 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 NFKBIEO00221 500 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 NCK2O43639 380 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 SH3BP5O60239 455 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 DGKIO75912 1065 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 TFPTP0C1Z6 253 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 PRKACBP22694 351 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 HOXD10P28358 340 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 GPC1P35052 558 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 HSD17B3P37058 310 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 VHLP40337 213 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 IARSP41252 1262 aaKnown RBP3.85□□□□□ -1.79
COL8A1-205ENST00000463753 PAFAH1B1P43034 410 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 CCT8P50990 548 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF131P52739 623 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 SOX10P56693 466 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 POLR2FP61218 127 aaKnown RBP3.85□□□□□ -1.79
COL8A1-205ENST00000463753 GFPT1Q06210 699 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF844Q08AG5 666 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 DCTN2Q13561 401 aaKnown RBP3.85□□□□□ -1.79
COL8A1-205ENST00000463753 NR1I3Q14994 352 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 SLC9C2Q5TAH2 1124 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF449Q6P9G9 518 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 OTUD6AQ7L8S5 288 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 TRIM46Q7Z4K8 759 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 PATL1Q86TB9 770 aaKnown RBP3.85□□□□□ -1.79
COL8A1-205ENST00000463753 FAM20CQ8IXL6 584 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 ST13P4Q8IZP2 240 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-205ENST00000463753 MMGT1Q8N4V1 131 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 GOLM1Q8NBJ4 401 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 ARHGEF2Q92974 986 aaKnown RBP3.85□□□□□ -1.79
COL8A1-205ENST00000463753 ITPKCQ96DU7 683 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 VMP1Q96GC9 406 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 MS4A14Q96JA4 679 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 NSMCE3Q96MG7 304 aa3.85□□□□□ -1.79
COL8A1-205ENST00000463753 ERP44Q9BS26 406 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms