RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 CHRNA1P02708 482 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 IQCF3P0C7M6 154 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 CCDC172P0C7W6 258 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 UBASH3AP57075 661 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 MCCD1P59942 119 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 ZNF200P98182 395 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 FAAP100Q0VG06 881 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 PPIGQ13427 754 aaKnown RBP eCLIP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 NOLC1Q14978 699 aaKnown RBP eCLIP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 IQCB1Q15051 598 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 SNRNP35Q16560 246 aaKnown RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 ZNF568Q3ZCX4 644 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 FBXO47Q5MNV8 452 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 ZNF618Q5T7W0 954 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 TWF2Q6IBS0 349 aaKnown RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 RUFY4Q6ZNE9 571 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 KSR1Q8IVT5 923 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 FAM186BQ8IYM0 893 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 AOPEPQ8N6M6 819 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 ZNF397Q8NF99 534 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 FAXDC2Q96IV6 333 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 FBXL18Q96ME1 805 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 OSMRQ99650 979 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 NOC4LQ9BVI4 516 aaKnown RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 TARS2Q9BW92 718 aaKnown RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 IFIH1Q9BYX4 1025 aaKnown RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 TRIM5Q9C035 493 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 SEMA6BQ9H3T3 888 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 FAM124BQ9H5Z6 455 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 ELAC1Q9H777 363 aaKnown RBP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 AGPAT5Q9NUQ2 364 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 FANCLQ9NW38 375 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 HSPBP1Q9NZL4 362 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 STK39Q9UEW8 545 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 PADI3Q9ULW8 664 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 ATP11BQ9Y2G3 1177 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 GIT1Q9Y2X7 761 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 PCDHB7Q9Y5E2 793 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.06□□□□□ -1.12
EPHA4-210ENST00000463446 ZMYM2Q9UBW7 1377 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 GTPBP10A4D1E9 387 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 KCNJ18B7U540 433 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 PES1O00541 588 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 TSPAN1O60635 241 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 BAIAP3O94812 1187 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 KIF4AO95239 1232 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 CD44P16070 742 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 ATF7P17544 494 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 ARF4P18085 180 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 PROZP22891 400 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 GRM5P41594 1212 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 VAMP7P51809 220 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 ATN1P54259 1190 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 SOX10P56693 466 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 STX17P56962 302 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 PLCB2Q00722 1185 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 DRP2Q13474 957 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 KCNJ12Q14500 433 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 MAN2A1Q16706 1144 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 DUOXA2Q1HG44 320 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 ZCWPW2Q504Y3 356 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 WDR44Q5JSH3 913 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 MFSD5Q6N075 450 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 SARM1Q6SZW1 724 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 DHX40Q8IX18 779 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 ZC3H3Q8IXZ2 948 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 SMYD4Q8IYR2 804 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 TTC39CQ8N584 583 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 BSNDQ8WZ55 320 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 TAF4BQ92750 862 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 DPF3Q92784 378 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 ANKRD36BP1Q96IX9 119 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 MFSD14AQ96MC6 490 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 TUBGCP2Q9BSJ2 902 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 IMPG2Q9BZV3 1241 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 NUCKS1Q9H1E3 243 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 GRPEL1Q9HAV7 217 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 POLD4Q9HCU8 107 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 PTPRHQ9HD43 1115 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 RGS18Q9NS28 235 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 LIMA1Q9UHB6 759 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 LRFN2Q9ULH4 789 aa8.05□□□□□ -1.12
EPHA4-210ENST00000463446 PIN4Q9Y237 131 aaKnown RBP8.05□□□□□ -1.12
EPHA4-210ENST00000463446 SCN10AQ9Y5Y9 1956 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 C19orf67A6NJJ6 358 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 CCDC85CA6NKD9 419 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 CLIC2O15247 247 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 ZC3H11AO75152 810 aaKnown RBP eCLIP8.04□□□□□ -1.12
EPHA4-210ENST00000463446 PHACTR2O75167 634 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 TNNC2P02585 160 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 FAM163BP0C2L3 166 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 ITGA4P13612 1032 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 P4HA1P13674 534 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 TNNI1P19237 187 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 EN2P19622 333 aaPredicted RBP8.04□□□□□ -1.12
EPHA4-210ENST00000463446 CYP3A5P20815 502 aa8.04□□□□□ -1.12
EPHA4-210ENST00000463446 RFX1P22670 979 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms