RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TRIP11Q15643 1979 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 BICDL2A1A5D9 508 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 C9IYK1 514 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ZNF623O75123 536 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 NPTXRO95502 500 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 NR3C1P04150 777 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ACRP10323 421 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ZSCAN20P17040 1043 aaPredicted RBP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 EPHB4P54760 987 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 FAM189BP81408 668 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 FPGSQ05932 587 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 NOLC1Q14978 699 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 NCAPHQ15003 741 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 IQCB1Q15051 598 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ARMCX5Q6P1M9 558 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 CRELD2Q6UXH1 353 aaPredicted RBP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 LRRC55Q6ZSA7 311 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 CEP120Q8N960 986 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 SMG8Q8ND04 991 aaKnown RBP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 FBXL18Q96ME1 805 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 TSG101Q99816 390 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 TCHPQ9BT92 498 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 TSPY26PQ9H489 355 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 HSPBP1Q9NZL4 362 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 AGO2Q9UKV8 859 aaKnown RBP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 NR2E3Q9Y5X4 410 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 A0A0U1RQF3 1178 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 KIAA0391O15091 583 aaKnown RBP15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 OGTO15294 1046 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 NR2F2P24468 414 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 ZNF165P49910 485 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 FKBP3Q00688 224 aaKnown RBP15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 PPIGQ13427 754 aaKnown RBP eCLIP15.16■□□□□ 0.022e-8■□□□□ 9.7
PHACTR4-203ENST00000463428 ADAM9Q13443 819 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 TMEM132AQ24JP5 1023 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 ZBTB41Q5SVQ8 909 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 TWF2Q6IBS0 349 aaKnown RBP15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 CRIPAKQ8N1N5 446 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 ADPGKQ9BRR6 497 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 FAM105AQ9NUU6 356 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 ANK1P16157 1881 aa15.16■□□□□ 0.02
PHACTR4-203ENST00000463428 CITO14578 2027 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 GOLGA8IPA6NC78 632 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 GOLGA8JA6NMD2 632 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 MEFVO15553 781 aaPredicted RBP15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 CAVIN2O95810 425 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 ATF7P17544 494 aaPredicted RBP15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 GRM5P41594 1212 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 CASP4P49662 377 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 CYP2J2P51589 502 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 SEZ6Q53EL9 994 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 TMEM240Q5SV17 173 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 SLC24A5Q71RS6 500 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 ZNF598Q86UK7 904 aaKnown RBP15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 GAS2L3Q86XJ1 694 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 IRF2BP1Q8IU81 584 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 DHX40Q8IX18 779 aaKnown RBP15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 TMEM192Q8IY95 271 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 XXYLT1Q8NBI6 393 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 SAAL1Q96ER3 474 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 EEF2KMTQ96G04 330 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 ANP32EQ9BTT0 268 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 MSTO1Q9BUK6 570 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 NAT10Q9H0A0 1025 aaKnown RBP15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 CBX8Q9HC52 389 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 C1orf112Q9NSG2 853 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 CPSF3Q9UKF6 684 aaKnown RBP15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 HES2Q9Y543 173 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 IPPQ9Y573 584 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 PCDHB2Q9Y5E7 798 aa15.15■□□□□ 0.02
PHACTR4-203ENST00000463428 ABHD14A-ACY1A0A1B0GW23 586 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 IKBKBO14920 756 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 EXTL3O43909 919 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 AKAP3O75969 853 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 LDHAP00338 332 aaKnown RBP15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 HARSP12081 509 aaKnown RBP15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 RPL13P26373 211 aaKnown RBP15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 TNFSF9P41273 254 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 MATR3P43243 847 aaKnown RBP eCLIP15.14■□□□□ 0.013e-7■□□□□ 8.1
PHACTR4-203ENST00000463428 ACOT2P49753 483 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 MCCD1P59942 119 aaPredicted RBP15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 IKBKEQ14164 716 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 ZNF365Q70YC5 407 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 FILIP1Q7Z7B0 1213 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 ECHDC2Q86YB7 292 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 THNSL1Q8IYQ7 743 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 CSGALNACT2Q8N6G5 542 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 BORCS6Q96GS4 357 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 CEP63Q96MT8 703 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.14■□□□□ 0.017e-6■□□□□ 9.4
PHACTR4-203ENST00000463428 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 HSD3B7Q9H2F3 369 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 NXF3Q9H4D5 531 aaKnown RBP15.14■□□□□ 0.01
PHACTR4-203ENST00000463428 CEP290O15078 2479 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms