RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 HIPK3Q9H422 1215 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 CHST12Q9NRB3 414 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 TMEM39AQ9NV64 488 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 AGO2Q9UKV8 859 aaKnown RBP15.67■□□□□ 0.1
COL6A1-202ENST00000463060 ALPK3Q96L96 1907 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 GOLGA6L19H0YKK7 550 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 N4BP3O15049 544 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 OGTO15294 1046 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 SLC16A3O15427 465 aaKnown RBP15.66■□□□□ 0.1
COL6A1-202ENST00000463060 PARNO95453 639 aaKnown RBP15.66■□□□□ 0.1
COL6A1-202ENST00000463060 CXCL10P02778 98 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 CYP2J2P51589 502 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 TPD52L1Q16890 204 aaPredicted RBP15.66■□□□□ 0.1
COL6A1-202ENST00000463060 TCP11X2Q5H9J9 407 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 NOTUMQ6P988 496 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 SLC27A1Q6PCB7 646 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 FAM43BQ6ZT52 329 aaPredicted RBP15.66■□□□□ 0.1
COL6A1-202ENST00000463060 FRMD5Q7Z6J6 570 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 CCDC51Q96ER9 411 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 MFSD14AQ96MC6 490 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 KIAA1586Q9HCI6 787 aa15.66■□□□□ 0.1
COL6A1-202ENST00000463060 LIMA1Q9UHB6 759 aaKnown RBP15.66■□□□□ 0.1
COL6A1-202ENST00000463060 MKI67P46013 3256 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 GOLGA6L3A6NEY3 463 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 EXTL3O43909 919 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 MGEA5O60502 916 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 GNA14O95837 355 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 LDHAP00338 332 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 ADRB2P07550 413 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 ITGB8P26012 769 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 EEF1GP26641 437 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 CYP2C18P33260 490 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 PSMC2P35998 433 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 POU5F1Q01860 360 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 NCBP1Q09161 790 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 NOLC1Q14978 699 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 PLEKHG4Q58EX7 1191 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 HSP90AA4PQ58FG1 418 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 ZBTB41Q5SVQ8 909 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 RTN4RL1Q86UN2 441 aaPredicted RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 CBWD2Q8IUF1 395 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 TRIM59Q8IWR1 403 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 GPD1LQ8N335 351 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 SAAL1Q96ER3 474 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 CNOT6LQ96LI5 555 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 TCHPQ9BT92 498 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 MSTO1Q9BUK6 570 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 EIF2AQ9BY44 585 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 ANKFY1Q9P2R3 1169 aa15.65■□□□□ 0.1
COL6A1-202ENST00000463060 CPSF3Q9UKF6 684 aaKnown RBP15.65■□□□□ 0.1
COL6A1-202ENST00000463060 GOLGA8IPA6NC78 632 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 GOLGA8JA6NMD2 632 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 KCNJ18B7U540 433 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 MEFVO15553 781 aaPredicted RBP15.64■□□□□ 0.09
COL6A1-202ENST00000463060 EXOC3O60645 756 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 TIMP1P01033 207 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 CCL23P55773 120 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 ENPEPQ07075 957 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 SPAG1Q07617 926 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 NFX1Q12986 1120 aaKnown RBP15.64■□□□□ 0.09
COL6A1-202ENST00000463060 PAK2Q13177 524 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 KCNJ12Q14500 433 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 SNRNP35Q16560 246 aaKnown RBP15.64■□□□□ 0.09
COL6A1-202ENST00000463060 DCAF4L1Q3SXM0 396 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 ZNF568Q3ZCX4 644 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 C1orf220Q5T0J3 134 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 CEP135Q66GS9 1140 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 SARM1Q6SZW1 724 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 ZBTB33Q86T24 672 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 FAM114A1Q8IWE2 563 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 FAM186BQ8IYM0 893 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 CEP120Q8N960 986 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 PLEKHO2Q8TD55 490 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 SCLYQ96I15 445 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 FAM213AQ9BRX8 229 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 PPP1R12CQ9BZL4 782 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 TANC1Q9C0D5 1861 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 GRPEL1Q9HAV7 217 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 METTL14Q9HCE5 456 aaKnown RBP15.64■□□□□ 0.09
COL6A1-202ENST00000463060 PIN4Q9Y237 131 aaKnown RBP15.64■□□□□ 0.09
COL6A1-202ENST00000463060 FRMD4BQ9Y2L6 1034 aa15.64■□□□□ 0.09
COL6A1-202ENST00000463060 CLTAP09496 248 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 TNFSF9P41273 254 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 GRM5P41594 1212 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 ACOT2P49753 483 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 TPM4P67936 248 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 FAM189BP81408 668 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 FANCCQ00597 558 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 KRT31Q15323 416 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 TCTN1Q2MV58 587 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 SEZ6Q53EL9 994 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 MIIPQ5JXC2 388 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 MRPL10Q7Z7H8 261 aaKnown RBP15.63■□□□□ 0.09
COL6A1-202ENST00000463060 TMEM192Q8IY95 271 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 RDH13Q8NBN7 331 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 SMG8Q8ND04 991 aaKnown RBP15.63■□□□□ 0.09
COL6A1-202ENST00000463060 TET1Q8NFU7 2136 aa15.63■□□□□ 0.09
COL6A1-202ENST00000463060 IFIH1Q9BYX4 1025 aaKnown RBP15.63■□□□□ 0.09
COL6A1-202ENST00000463060 SCN5AQ14524 2016 aa15.62■□□□□ 0.09
COL6A1-202ENST00000463060 ZNF233A6NK53 670 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms