RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 DYDC2Q96IM9 177 aa17.5■□□□□ 0.39
SND1-203ENST00000463020 PAAF1Q9BRP4 392 aa17.5■□□□□ 0.39
SND1-203ENST00000463020 KANSL3Q9P2N6 904 aa17.5■□□□□ 0.39
SND1-203ENST00000463020 NUMBLQ9Y6R0 609 aa17.5■□□□□ 0.39
SND1-203ENST00000463020 DOCK6Q96HP0 2047 aa17.5■□□□□ 0.39
SND1-203ENST00000463020 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 ANHXE9PGG2 379 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 LMNAP02545 664 aaKnown RBP17.49■□□□□ 0.39
SND1-203ENST00000463020 SP9P0CG40 484 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 LAMP2P13473 410 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 YWHABP31946 246 aaKnown RBP17.49■□□□□ 0.39
SND1-203ENST00000463020 CYP4A11Q02928 519 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 MBTD1Q05BQ5 628 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 STK3Q13188 491 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 LILRA6Q6PI73 481 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 PRSS55Q6UWB4 352 aaPredicted RBP17.49■□□□□ 0.39
SND1-203ENST00000463020 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 RHOBTB2Q9BYZ6 727 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 ARHGEF3Q9NR81 526 aa17.49■□□□□ 0.39
SND1-203ENST00000463020 ZFHX4Q86UP3 3567 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 A0A087WWV3 80 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 P4HBP07237 508 aaKnown RBP17.48■□□□□ 0.39
SND1-203ENST00000463020 IGFBP6P24592 240 aaPredicted RBP17.48■□□□□ 0.39
SND1-203ENST00000463020 RFC5P40937 340 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 PTENP60484 403 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 CAPSQ13938 189 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 RTP2Q5QGT7 225 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 FUT10Q6P4F1 479 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 FGF14Q92915 247 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 JPH2Q9BR39 696 aaPredicted RBP17.48■□□□□ 0.39
SND1-203ENST00000463020 ANP32EQ9BTT0 268 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 BACH2Q9BYV9 841 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
SND1-203ENST00000463020 KLK14Q9P0G3 267 aa17.48■□□□□ 0.39
SND1-203ENST00000463020 GAS2O43903 313 aaKnown RBP17.47■□□□□ 0.39
SND1-203ENST00000463020 DEXIO95424 95 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 ARF4P18085 180 aaPredicted RBP17.47■□□□□ 0.39
SND1-203ENST00000463020 XKR9Q5GH70 373 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 NCAPH2Q6IBW4 605 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 PARM1Q6UWI2 310 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 C4orf19Q8IY42 314 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 HASPINQ8TF76 798 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 PHF20Q9BVI0 1012 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 PRKD2Q9BZL6 878 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 CSRNP2Q9H175 543 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 STK39Q9UEW8 545 aa17.47■□□□□ 0.39
SND1-203ENST00000463020 MTF2Q9Y483 593 aaPredicted RBP17.47■□□□□ 0.39
SND1-203ENST00000463020 CACNA1IQ9P0X4 2223 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 TTLL13PA6NNM8 815 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 INO80B-WBP1J3KQ70 363 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 WNT7AO00755 349 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 ADAM12O43184 909 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 ERLIN2O94905 339 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 GPC5P78333 572 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 EPHA7Q15375 998 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 PHLDB3Q6NSJ2 640 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 RUFY3Q7L099 469 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 KRT25Q7Z3Z0 450 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 TRIM22Q8IYM9 498 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 STAMQ92783 540 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 MTRQ99707 1265 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 C22orf23Q9BZE7 217 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 ZSWIM6Q9HCJ5 1215 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 SIT1Q9Y3P8 196 aa17.46■□□□□ 0.39
SND1-203ENST00000463020 TDRD15B5MCY1 1934 aaKnown RBP17.46■□□□□ 0.39
SND1-203ENST00000463020 FANCMQ8IYD8 2048 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
SND1-203ENST00000463020 NPTXRO95502 500 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 RFX1P22670 979 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 GLRA2P23416 452 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 PPP4R3AQ6IN85 833 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 NOTUMQ6P988 496 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 DCLRE1AQ6PJP8 1040 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 POTEHQ6S545 545 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 CYP26C1Q6V0L0 522 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 PIK3AP1Q6ZUJ8 805 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 GRASPQ7Z6J2 395 aaPredicted RBP17.45■□□□□ 0.38
SND1-203ENST00000463020 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 C1orf210Q8IVY1 113 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 PJA1Q8NG27 643 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 FAM20AQ96MK3 541 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 PIDD1Q9HB75 910 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 UBN1Q9NPG3 1134 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 SLC2A4RGQ9NR83 387 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 ZDHHC7Q9NXF8 308 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 ADAM28Q9UKQ2 775 aa17.45■□□□□ 0.38
SND1-203ENST00000463020 MTCL1Q9Y4B5 1905 aaKnown RBP17.45■□□□□ 0.38
SND1-203ENST00000463020 ZMYND10O75800 440 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 SLITRK3O94933 977 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 ARL2P36404 184 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 SNW1Q13573 536 aaKnown RBP17.44■□□□□ 0.38
SND1-203ENST00000463020 IFNLR1Q8IU57 520 aaPredicted RBP17.44■□□□□ 0.38
SND1-203ENST00000463020 TPH2Q8IWU9 490 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 SUMF1Q8NBK3 374 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 CNNM3Q8NE01 707 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 ITFG1Q8TB96 612 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 HDAC7Q8WUI4 952 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 CLSTN3Q9BQT9 956 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 PLEKHA4Q9H4M7 779 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 FNIP2Q9P278 1114 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms