RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 HHIPL1Q96JK4 782 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 DAGLAQ9Y4D2 1042 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.59□□□□□ -1.84
SMC4-203ENST00000462668 FAM171A2A8MVW0 826 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 NFIBO00712 420 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 APOL1O14791 398 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 EFEMP2O95967 443 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 SPARCL1Q14515 664 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 TRIM71Q2Q1W2 868 aaKnown RBP3.59□□□□□ -1.84
SMC4-203ENST00000462668 SLC4A8Q2Y0W8 1093 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 MUM1L1Q5H9M0 696 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 CCDC62Q6P9F0 684 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 GAREM2Q75VX8 874 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 CEP68Q76N32 757 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 HDAC2Q92769 488 aaKnown RBP3.59□□□□□ -1.84
SMC4-203ENST00000462668 TOE1Q96GM8 510 aaKnown RBP3.59□□□□□ -1.84
SMC4-203ENST00000462668 EVLQ9UI08 416 aaPredicted RBP3.59□□□□□ -1.84
SMC4-203ENST00000462668 EDARQ9UNE0 448 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 NR2E3Q9Y5X4 410 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 IL1R1P14778 569 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 TARDBPQ13148 414 aaKnown RBP eCLIP3.59□□□□□ -1.843e-6■■■■□ 21.4
SMC4-203ENST00000462668 BTBD8Q5XKL5 378 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 PLBD1Q6P4A8 553 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 MIB1Q86YT6 1006 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 SHISA5Q8N114 240 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 OR8H2Q8N162 312 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 SEC14L1Q92503 715 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 C18orf8Q96DM3 657 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 EIF2AK1Q9BQI3 630 aaKnown RBP3.59□□□□□ -1.84
SMC4-203ENST00000462668 NSMCE4AQ9NXX6 385 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 IGSF9Q9P2J2 1179 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 DPP7Q9UHL4 492 aa3.59□□□□□ -1.84
SMC4-203ENST00000462668 TDRD9Q8NDG6 1382 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 SLC27A2O14975 620 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 TGFB3P10600 412 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 PAN2Q504Q3 1202 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 LILRA3Q8N6C8 439 aaPredicted RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 GLB1L3Q8NCI6 653 aaPredicted RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 ADAMTS15Q8TE58 950 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 WFDC12Q8WWY7 111 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 SCARF2Q96GP6 870 aaPredicted RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 PLVAPQ9BX97 442 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 CD244Q9BZW8 370 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 WDCPQ9H6R7 721 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 FAM95CA0A1B0GW59 222 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 FAM234BA2RU67 622 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 IPO5O00410 1097 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 TMCC2O75069 709 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 ROR1Q01973 937 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 ADCY2Q08462 1091 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 SPIDRQ14159 915 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 ARL13BQ3SXY8 428 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 FAM26FQ5R3K3 315 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 KANK2Q63ZY3 851 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 KIAA0408Q6ZU52 694 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 RSRC2Q7L4I2 434 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 TRIM48Q8IWZ4 208 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 TRMT2AQ8IZ69 625 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 FAM9BQ8IZU0 186 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 CDYL2Q8N8U2 506 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 CCT6BQ92526 530 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 KAT5Q92993 513 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 ASB2Q96Q27 587 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 SEC62Q99442 399 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 KATNAL1Q9BW62 490 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 C14orf93Q9H972 538 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 RPGRIP1LQ68CZ1 1315 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 A0A1W2PRQ8 180 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 POM121BA6NF01 834 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 PRSS29PA6NIE9 313 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 EIF3FO00303 357 aaPredicted RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 ACKR2O00590 384 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 SGSM2O43147 1006 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 USO1O60763 962 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 RPN1P04843 607 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 MMEP08473 750 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 NCAM1P13591 858 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 MAPK9P45984 424 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 TUBP50607 506 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 SNAPC2Q13487 334 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 PRICKLE4Q2TBC4 344 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 MAATS1Q7Z4T9 603 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 C7orf31Q8N865 590 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 NELL1Q92832 810 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 RNPEPQ9H4A4 650 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 JMJD4Q9H9V9 463 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 RBM12Q9NTZ6 932 aaKnown RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 FAM30AQ9NZY2 134 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.58□□□□□ -1.84
SMC4-203ENST00000462668 RABGAP1Q9Y3P9 1069 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 PAXBP1Q9Y5B6 917 aa3.58□□□□□ -1.84
SMC4-203ENST00000462668 LGALS16A8MUM7 142 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 ALX3O95076 343 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 SMARCA1P28370 1054 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 MVKQ03426 396 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 PDE1CQ14123 709 aaPredicted RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 NR0B2Q15466 257 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 CLUL1Q15846 466 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 TRAPPC3LQ5T215 181 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 KRT28Q7Z3Y7 464 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms