RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 NCOA5Q9HCD5 579 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 PARD6AQ9NPB6 346 aa6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 ZNF358Q9NW07 568 aa6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 FAM13BQ9NYF5 915 aa6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 DLGAP2Q9P1A6 1054 aa6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 PUF60Q9UHX1 559 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 LIMCH1Q9UPQ0 1083 aa6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 PCDHB11Q9Y5F2 797 aa6.73□□□□□ -1.33
SMARCC1-204ENST00000462198 NID2Q14112 1375 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 LOXHD1Q8IVV2 1947 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 HELZ2Q9BYK8 2649 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 UNC79Q9P2D8 2635 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 PNMA6FA0A0J9YX94 578 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 VGLL3A8MV65 326 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 NDUFB5O43674 189 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 CYTH3O43739 400 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 PFKFB2O60825 505 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 PRPF40AO75400 957 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 EIF3JO75822 258 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 CDKL5O76039 1030 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 MPSTP25325 297 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 ADD1P35611 737 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 MCM2P49736 904 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 AKAP17AQ02040 695 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 ME3Q16798 604 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 ZNF528Q3MIS6 628 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 TRIM22Q8IYM9 498 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 THNSL1Q8IYQ7 743 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 NECAB1Q8N987 351 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 NETO1Q8TDF5 533 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 NSUN6Q8TEA1 469 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 TNPO1Q92973 898 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 PDLIM2Q96JY6 352 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 ZSCAN31Q96LW9 406 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 SPATA33Q96N06 139 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 IWS1Q96ST2 819 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 TCF25Q9BQ70 676 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 NGRNQ9NPE2 291 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 ENTPD7Q9NQZ7 604 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 CALCOCO1Q9P1Z2 691 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 CA14Q9ULX7 337 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 PCDHA1Q9Y5I3 950 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 HCFC2Q9Y5Z7 792 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 MRVI1Q9Y6F6 885 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 SPEGQ15772 3267 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 FNDC1Q4ZHG4 1894 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 ABCB11O95342 1321 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 CNTNAP5Q8WYK1 1306 aa6.72□□□□□ -1.33
SMARCC1-204ENST00000462198 IGF2RP11717 2491 aa6.71□□□□□ -1.33
SMARCC1-204ENST00000462198 hCG_1642624A0A1W2PR95 340 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 TTC36A6NLP5 189 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 C1QTNF9BB2RNN3 333 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 TMEM229AB2RXF0 380 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 ZBTB24O43167 697 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 PRPF3O43395 683 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 TBC1D4O60343 1298 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 PPP1R11O60927 126 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 LARGE1O95461 756 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 C1QTNF9P0C862 333 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 GLULP15104 373 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 HMGN5P82970 282 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 CSTF1Q05048 431 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 SSRP1Q08945 709 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 SPEM2Q0P670 501 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 SCRN1Q12765 414 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 NAA30Q147X3 362 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 SLC35G1Q2M3R5 365 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 CELF3Q5SZQ8 465 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 KIAA1841Q6NSI8 718 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 XRRA1Q6P2D8 792 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 SASS6Q6UVJ0 657 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 OTOP3Q7RTS5 596 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 HEATR3Q7Z4Q2 680 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 HSCBQ8IWL3 235 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 COLGALT1Q8NBJ5 622 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 LINC01599Q8WXQ3 324 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 MRPS27Q92552 414 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 FOXJ1Q92949 421 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 PHKBQ93100 1093 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 GTF3C6Q969F1 213 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 MTMR8Q96EF0 704 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 TIGD1Q96MW7 591 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 GBP4Q96PP9 640 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 SLC26A6Q9BXS9 759 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 AGO3Q9H9G7 860 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 METTL5Q9NRN9 209 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 TYW1Q9NV66 732 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 IGSF9Q9P2J2 1179 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 PARP2Q9UGN5 583 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 LRFN2Q9ULH4 789 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 SMG5Q9UPR3 1016 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 LZTS1Q9Y250 596 aa6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 MRPL11Q9Y3B7 192 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-204ENST00000462198 UQCRHLA0A096LP55 91 aa6.7□□□□□ -1.34
SMARCC1-204ENST00000462198 LAMTOR5O43504 91 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms