RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 FERMT3Q86UX7 667 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 BLIDQ8IZY5 108 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 FAM177A1Q8N128 213 aaPredicted RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 DAGLBQ8NCG7 672 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 PJA1Q8NG27 643 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 RUBCNQ92622 972 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 GAD1Q99259 594 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 EIF2AQ9BY44 585 aaKnown RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 PIDD1Q9HB75 910 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 NCOA5Q9HCD5 579 aaKnown RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 DLL3Q9NYJ7 618 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 WRAP73Q9P2S5 460 aaPredicted RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 DDX25Q9UHL0 483 aaKnown RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 VAV3Q9UKW4 847 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 SNX14Q9Y5W7 946 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 ZFP37Q9Y6Q3 630 aaPredicted RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 SLC37A4O43826 429 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 TSPAN1O60635 241 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 ERLIN2O94905 339 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 GLULP15104 373 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 STARD6P59095 220 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 PTENP60484 403 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 CCT2P78371 535 aaKnown RBP12.1□□□□□ -0.47
CBX3-205ENST00000462165 NPY5RQ15761 445 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 USP41Q3LFD5 358 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 GALNT17Q6IS24 598 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 FUT10Q6P4F1 479 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 NOTUMQ6P988 496 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 C4orf19Q8IY42 314 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 TRIM22Q8IYM9 498 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 BORCS6Q96GS4 357 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 FAM20AQ96MK3 541 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 ZFP42Q96MM3 310 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 COLEC11Q9BWP8 271 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 GPR62Q9BZJ7 368 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 KCNMB3Q9NPA1 279 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 GIT1Q9Y2X7 761 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 NUMBLQ9Y6R0 609 aa12.1□□□□□ -0.47
CBX3-205ENST00000462165 CEP250Q9BV73 2442 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 ZMYM2Q9UBW7 1377 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 POTEMA6NI47 508 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 CDC45O75419 566 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 ZMYND10O75800 440 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 DEXIO95424 95 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 YWHABP31946 246 aaKnown RBP12.09□□□□□ -0.47
CBX3-205ENST00000462165 HSPA4P34932 840 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 CREMQ03060 361 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 SSRP1Q08945 709 aaKnown RBP12.09□□□□□ -0.47
CBX3-205ENST00000462165 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
CBX3-205ENST00000462165 EMC2Q15006 297 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 INF2Q27J81 1249 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 PPP4R3AQ6IN85 833 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 OTUD6AQ7L8S5 288 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 KRT25Q7Z3Z0 450 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
CBX3-205ENST00000462165 MAML2Q8IZL2 1156 aaPredicted RBP12.09□□□□□ -0.47
CBX3-205ENST00000462165 DCLK2Q8N568 766 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 SUMF1Q8NBK3 374 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 GSTCDQ8NEC7 633 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 FGF14Q92915 247 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 SHDQ96IW2 340 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 CPB2Q96IY4 423 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 MTRQ99707 1265 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 FOXQ1Q9C009 403 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
CBX3-205ENST00000462165 ADAM28Q9UKQ2 775 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 HES2Q9Y543 173 aa12.09□□□□□ -0.47
CBX3-205ENST00000462165 KANSL1LA0AUZ9 987 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 KINO60870 393 aaKnown RBP12.08□□□□□ -0.48
CBX3-205ENST00000462165 LRRN2O75325 713 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 FSHRP23945 695 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 POU5F1BQ06416 359 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 MXD4Q14582 209 aaPredicted RBP12.08□□□□□ -0.48
CBX3-205ENST00000462165 EPHA7Q15375 998 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 AMHR2Q16671 573 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 ZNF528Q3MIS6 628 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 GLYCTKQ8IVS8 523 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 B3GALT6Q96L58 329 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 LXNQ9BS40 222 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 RPP25Q9BUL9 199 aaKnown RBP12.08□□□□□ -0.48
CBX3-205ENST00000462165 DDX23Q9BUQ8 820 aaKnown RBP12.08□□□□□ -0.48
CBX3-205ENST00000462165 TRIM6Q9C030 488 aaPredicted RBP12.08□□□□□ -0.48
CBX3-205ENST00000462165 SLKQ9H2G2 1235 aaPredicted RBP12.08□□□□□ -0.48
CBX3-205ENST00000462165 FBXW11Q9UKB1 542 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
CBX3-205ENST00000462165 VWA8A3KMH1 1905 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 COL4A3Q01955 1670 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 INO80B-WBP1J3KQ70 363 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 ZBTB39O15060 712 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 TBX3O15119 743 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 SPTLC1O15269 473 aa12.07□□□□□ -0.48
CBX3-205ENST00000462165 GCFC2P16383 781 aaKnown RBP12.07□□□□□ -0.48
CBX3-205ENST00000462165 ARF4P18085 180 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms