RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 TMEM175Q9BSA9 504 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 RUSC1Q9BVN2 902 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 PHF7Q9BWX1 381 aaPredicted RBP17.14■□□□□ 0.33
NUP50-213ENST00000461437 CCDC113Q9H0I3 377 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 PRMT7Q9NVM4 692 aaPredicted RBP17.14■□□□□ 0.33
NUP50-213ENST00000461437 SNTG2Q9NY99 539 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 KANSL3Q9P2N6 904 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 SMC3Q9UQE7 1217 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 CITO14578 2027 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 ALADP13716 330 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 NAMPTP43490 491 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 DSC1Q08554 894 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
NUP50-213ENST00000461437 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.33
NUP50-213ENST00000461437 DTHD1Q6ZMT9 781 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 HASPINQ8TF76 798 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 SLC22A17Q8WUG5 538 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 KLHL5Q96PQ7 755 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 PNMA5Q96PV4 448 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 POMKQ9H5K3 350 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 UBN1Q9NPG3 1134 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 GIT1Q9Y2X7 761 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 HCN4Q9Y3Q4 1203 aa17.13■□□□□ 0.33
NUP50-213ENST00000461437 ARIH1Q9Y4X5 557 aaPredicted RBP17.13■□□□□ 0.33
NUP50-213ENST00000461437 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 INPPL1O15357 1258 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 HIP1RO75146 1068 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 CNPP09543 421 aaKnown RBP17.12■□□□□ 0.33
NUP50-213ENST00000461437 ATP2C1P98194 919 aaPredicted RBP17.12■□□□□ 0.33
NUP50-213ENST00000461437 RAD51AP2Q09MP3 1159 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 PDIA5Q14554 519 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 MAPK6Q16659 721 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 NT5DC1Q5TFE4 455 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 DAW1Q8N136 415 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 RSPH1Q8WYR4 309 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 HERC2P3Q9BVR0 1158 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
NUP50-213ENST00000461437 FSD2A1L4K1 749 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 CASTOR2A6NHX0 329 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 SFI1A8K8P3 1242 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 LILRB3O75022 631 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 RECQL4O94761 1208 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 SOD2P04179 222 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 KLRC2P26717 231 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 PEX3P56589 373 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 BMS1Q14692 1282 aaKnown RBP17.11■□□□□ 0.33
NUP50-213ENST00000461437 FAM187BQ17R55 369 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 RILPL1Q5EBL4 403 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 TMC5Q6UXY8 1006 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 GLYCTKQ8IVS8 523 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 PRIMPOLQ96LW4 560 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 RPS6KC1Q96S38 1066 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 GPR62Q9BZJ7 368 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 C2orf40Q9H1Z8 148 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 IRAK3Q9Y616 596 aa17.11■□□□□ 0.33
NUP50-213ENST00000461437 PDCD11Q14690 1871 aaKnown RBP17.11■□□□□ 0.33
NUP50-213ENST00000461437 CCDC169A6NNP5 214 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 ACKR2O00590 384 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 PTGESO14684 152 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 N4BP3O15049 544 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 MUTP22033 750 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 IGFBP6P24592 240 aaPredicted RBP17.1■□□□□ 0.33
NUP50-213ENST00000461437 PRPHP41219 470 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
NUP50-213ENST00000461437 GRIN1Q05586 938 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 MAPK7Q13164 816 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 TPRNQ4KMQ1 711 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 HERC4Q5GLZ8 1057 aaPredicted RBP17.1■□□□□ 0.33
NUP50-213ENST00000461437 GLRA4Q5JXX5 417 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 LARP1BQ659C4 914 aaKnown RBP17.1■□□□□ 0.33
NUP50-213ENST00000461437 RINT1Q6NUQ1 792 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 HACE1Q8IYU2 909 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 CEP120Q8N960 986 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 IFT74Q96LB3 600 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 ADAM7Q9H2U9 754 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 DNM3Q9UQ16 869 aa17.1■□□□□ 0.33
NUP50-213ENST00000461437 ZNF318Q5VUA4 2279 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 PRR33A8MZF0 331 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 C2CD4DB7Z1M9 353 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 LAD1O00515 517 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 EFEMP2O95967 443 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 URODP06132 367 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 SPATA31D3P0C874 917 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 HOXB8P17481 243 aaPredicted RBP17.09■□□□□ 0.33
NUP50-213ENST00000461437 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
NUP50-213ENST00000461437 CLCN4P51793 760 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 GRIK3Q13003 919 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 FUT10Q6P4F1 479 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 SPATA31D4Q6ZUB0 917 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 HFE2Q6ZVN8 426 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 CABP7Q86V35 215 aa17.09■□□□□ 0.33
NUP50-213ENST00000461437 RNF168Q8IYW5 571 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms