RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ST7Q9NRC1 585 aa21.85■■□□□ 1.09
CCM2-203ENST00000461377 PPME1Q9Y570 386 aa21.85■■□□□ 1.09
CCM2-203ENST00000461377 SIP14410 1827 aa21.85■■□□□ 1.09
CCM2-203ENST00000461377 ANKRD62A6NC57 917 aa21.85■■□□□ 1.09
CCM2-203ENST00000461377 LRRIQ4A6NIV6 560 aa21.85■■□□□ 1.09
CCM2-203ENST00000461377 MATR3P43243 847 aaKnown RBP eCLIP21.85■■□□□ 1.09
CCM2-203ENST00000461377 GABPB1Q06547 395 aaPredicted RBP21.85■■□□□ 1.09
CCM2-203ENST00000461377 SLC35G2Q8TBE7 412 aa21.85■■□□□ 1.09
CCM2-203ENST00000461377 PSPC1Q8WXF1 523 aaKnown RBP21.85■■□□□ 1.09
CCM2-203ENST00000461377 PBKQ96KB5 322 aa21.85■■□□□ 1.09
CCM2-203ENST00000461377 NT5C1BQ96P26 610 aa21.85■■□□□ 1.09
CCM2-203ENST00000461377 SEPT11Q9NVA2 429 aaKnown RBP21.85■■□□□ 1.09
CCM2-203ENST00000461377 DLATP10515 647 aaKnown RBP21.84■■□□□ 1.09
CCM2-203ENST00000461377 GJA5P36382 358 aa21.84■■□□□ 1.09
CCM2-203ENST00000461377 CLDN10P78369 228 aa21.84■■□□□ 1.09
CCM2-203ENST00000461377 KCTD2Q14681 263 aa21.84■■□□□ 1.09
CCM2-203ENST00000461377 SMC1AQ14683 1233 aaKnown RBP21.84■■□□□ 1.09
CCM2-203ENST00000461377 LDLRAD1Q5T700 205 aa21.84■■□□□ 1.09
CCM2-203ENST00000461377 CCNI2Q6ZMN8 369 aaPredicted RBP21.84■■□□□ 1.09
CCM2-203ENST00000461377 C15orf39Q6ZRI6 1047 aa21.84■■□□□ 1.09
CCM2-203ENST00000461377 RPUSD2Q8IZ73 545 aaKnown RBP21.84■■□□□ 1.09
CCM2-203ENST00000461377 EPS8L1Q8TE68 723 aa21.84■■□□□ 1.09
CCM2-203ENST00000461377 FAM167AQ96KS9 214 aa21.84■■□□□ 1.09
CCM2-203ENST00000461377 SUCLA2Q9P2R7 463 aaPredicted RBP21.84■■□□□ 1.09
CCM2-203ENST00000461377 NOCTQ9UK39 431 aaKnown RBP21.84■■□□□ 1.09
CCM2-203ENST00000461377 KCNK3O14649 394 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 MAFO75444 373 aaPredicted RBP21.83■■□□□ 1.09
CCM2-203ENST00000461377 ZMYND10O75800 440 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 SGPL1O95470 568 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 PRPF4BQ13523 1007 aaKnown RBP21.83■■□□□ 1.09
CCM2-203ENST00000461377 CASP8Q14790 479 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 PSMD6Q15008 389 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 GLE1Q53GS7 698 aaKnown RBP21.83■■□□□ 1.09
CCM2-203ENST00000461377 PEX26Q7Z412 305 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 NT5DC3Q86UY8 548 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 ARHGEF26Q96DR7 871 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 GPR20Q99678 358 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 ISCUQ9H1K1 167 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 MROH8Q9H579 483 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 TMEM134Q9H6X4 195 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 OSGEPQ9NPF4 335 aa21.83■■□□□ 1.09
CCM2-203ENST00000461377 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.83■■□□□ 1.091e-6■■■■■ 98.5
CCM2-203ENST00000461377 K7ERI5 159 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 LGR5O75473 907 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 CHRNB2P17787 502 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 ABCB4P21439 1286 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 USP8P40818 1118 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 CELF3Q5SZQ8 465 aaKnown RBP21.83■■□□□ 1.08
CCM2-203ENST00000461377 SLFN12LQ6IEE8 588 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 DAAM2Q86T65 1068 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 NOP9Q86U38 636 aaKnown RBP21.83■■□□□ 1.08
CCM2-203ENST00000461377 MORC4Q8TE76 937 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 HDAC7Q8WUI4 952 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 HAPLN2Q9GZV7 340 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 THAP2Q9H0W7 228 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 AZI2Q9H6S1 392 aa21.83■■□□□ 1.08
CCM2-203ENST00000461377 DMGDHQ9UI17 866 aaKnown RBP21.83■■□□□ 1.08
CCM2-203ENST00000461377 AGO2Q9UKV8 859 aaKnown RBP21.83■■□□□ 1.08
CCM2-203ENST00000461377 TULP1O00294 542 aaPredicted RBP21.82■■□□□ 1.08
CCM2-203ENST00000461377 ZC3H11AO75152 810 aaKnown RBP eCLIP21.82■■□□□ 1.08
CCM2-203ENST00000461377 CAPSQ13938 189 aa21.82■■□□□ 1.08
CCM2-203ENST00000461377 USP38Q8NB14 1042 aa21.82■■□□□ 1.08
CCM2-203ENST00000461377 ZNF516Q92618 1163 aa21.82■■□□□ 1.08
CCM2-203ENST00000461377 CYP26A1O43174 497 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 BUB1BO60566 1050 aaPredicted RBP21.81■■□□□ 1.08
CCM2-203ENST00000461377 MYBL2P10244 700 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 NLRP11P59045 1033 aaKnown RBP21.81■■□□□ 1.08
CCM2-203ENST00000461377 SNAPC2Q13487 334 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 TCEAL1Q15170 157 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 C8orf74Q6P047 294 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 SHCBP1Q8NEM2 672 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 BBXQ8WY36 941 aaPredicted RBP21.81■■□□□ 1.08
CCM2-203ENST00000461377 TAF1DQ9H5J8 278 aaPredicted RBP21.81■■□□□ 1.08
CCM2-203ENST00000461377 TMEM59LQ9UK28 342 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 LOC102724159A0A0B4J2E5 919 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 ADCY3O60266 1144 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 EDN1P05305 212 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 HADHBP55084 474 aaKnown RBP21.81■■□□□ 1.08
CCM2-203ENST00000461377 ERVK-9P63128 1117 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 PWP2Q15269 919 aaKnown RBP21.81■■□□□ 1.08
CCM2-203ENST00000461377 CRELD2Q6UXH1 353 aaPredicted RBP21.81■■□□□ 1.08
CCM2-203ENST00000461377 METTL13Q8N6R0 699 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 ACTRT1Q8TDG2 376 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 HES6Q96HZ4 224 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 PCDHB18PQ96TA0 734 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 TARS2Q9BW92 718 aaKnown RBP21.81■■□□□ 1.08
CCM2-203ENST00000461377 PRDM10Q9NQV6 1147 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 STIM2Q9P246 746 aa21.81■■□□□ 1.08
CCM2-203ENST00000461377 GLTPD2A6NH11 291 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 OAS2P29728 719 aaKnown RBP21.8■■□□□ 1.08
CCM2-203ENST00000461377 WNT7BP56706 349 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 GCNT1Q02742 428 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 HSDL1Q3SXM5 330 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 EAPPQ56P03 285 aaPredicted RBP21.8■■□□□ 1.08
CCM2-203ENST00000461377 CCDC62Q6P9F0 684 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 ENOSF1Q7L5Y1 443 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 PLPPR4Q7Z2D5 763 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 SLC47A2Q86VL8 602 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 RHOT2Q8IXI1 618 aa21.8■■□□□ 1.08
CCM2-203ENST00000461377 TATDN2Q93075 761 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms