RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 TLE6Q9H808 572 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 NGRNQ9NPE2 291 aaKnown RBP24.76■■□□□ 1.55
TRAF4-207ENST00000461195 PARP2Q9UGN5 583 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 NPHP3-ACAD11A0A0J9YXS1 232 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 ALDH2P05091 517 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 TXLNAP40222 546 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 NASPP49321 788 aaPredicted RBP24.75■■□□□ 1.55
TRAF4-207ENST00000461195 SCNN1GP51170 649 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 DHX8Q14562 1220 aaKnown RBP24.75■■□□□ 1.55
TRAF4-207ENST00000461195 MCM6Q14566 821 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 DCAF4L1Q3SXM0 396 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 EEF1DP3Q658K8 133 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 USP49Q70CQ1 688 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 TMC7Q7Z402 723 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 RBM23Q86U06 439 aaKnown RBP24.75■■□□□ 1.55
TRAF4-207ENST00000461195 TMEM173Q86WV6 379 aaPredicted RBP24.75■■□□□ 1.55
TRAF4-207ENST00000461195 KRI1Q8N9T8 703 aaKnown RBP24.75■■□□□ 1.55
TRAF4-207ENST00000461195 SPRYD3Q8NCJ5 442 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 SPIRE2Q8WWL2 714 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 CCDC39Q9UFE4 941 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 ODF2LQ9ULJ1 636 aa24.75■■□□□ 1.55
TRAF4-207ENST00000461195 H3BQ06 376 aaPredicted RBP24.74■■□□□ 1.55
TRAF4-207ENST00000461195 SLC16A4O15374 487 aa24.74■■□□□ 1.55
TRAF4-207ENST00000461195 ZSCAN22P10073 491 aaPredicted RBP24.74■■□□□ 1.55
TRAF4-207ENST00000461195 SMTNP53814 917 aa24.74■■□□□ 1.55
TRAF4-207ENST00000461195 ADAM15Q13444 863 aa24.74■■□□□ 1.55
TRAF4-207ENST00000461195 STK38Q15208 465 aa24.74■■□□□ 1.55
TRAF4-207ENST00000461195 FOXD4L5Q5VV16 416 aaPredicted RBP24.74■■□□□ 1.55
TRAF4-207ENST00000461195 APBB1IPQ7Z5R6 666 aaPredicted RBP24.74■■□□□ 1.55
TRAF4-207ENST00000461195 EFHBQ8N7U6 833 aa24.74■■□□□ 1.55
TRAF4-207ENST00000461195 FOXD4L4Q8WXT5 416 aaPredicted RBP24.74■■□□□ 1.55
TRAF4-207ENST00000461195 CDCA3Q99618 268 aaPredicted RBP24.74■■□□□ 1.55
TRAF4-207ENST00000461195 MRPL4Q9BYD3 311 aaKnown RBP24.74■■□□□ 1.55
TRAF4-207ENST00000461195 MIOSQ9NXC5 875 aa24.74■■□□□ 1.55
TRAF4-207ENST00000461195 KLK14Q9P0G3 267 aa24.74■■□□□ 1.55
TRAF4-207ENST00000461195 LARSQ9P2J5 1176 aaKnown RBP24.74■■□□□ 1.55
TRAF4-207ENST00000461195 FAN1Q9Y2M0 1017 aa24.74■■□□□ 1.55
TRAF4-207ENST00000461195 FSD2A1L4K1 749 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 LINC01565O15544 149 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 DDIT3P35638 169 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 LTBRP36941 435 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 CACNB1Q02641 598 aaPredicted RBP24.73■■□□□ 1.55
TRAF4-207ENST00000461195 SMC1AQ14683 1233 aaKnown RBP24.73■■□□□ 1.55
TRAF4-207ENST00000461195 BMS1Q14692 1282 aaKnown RBP24.73■■□□□ 1.55
TRAF4-207ENST00000461195 PUS10Q3MIT2 529 aaKnown RBP24.73■■□□□ 1.55
TRAF4-207ENST00000461195 DDX53Q86TM3 631 aaKnown RBP24.73■■□□□ 1.55
TRAF4-207ENST00000461195 COLGALT2Q8IYK4 626 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.73■■□□□ 1.55
TRAF4-207ENST00000461195 LARP4BQ92615 738 aaKnown RBP24.73■■□□□ 1.55
TRAF4-207ENST00000461195 RPS6KC1Q96S38 1066 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 REEP2Q9BRK0 252 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 SNTG2Q9NY99 539 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 TNFSF13BQ9Y275 285 aa24.73■■□□□ 1.55
TRAF4-207ENST00000461195 NRP1O14786 923 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 PER2O15055 1255 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 F13A1P00488 732 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 KRT18P05783 430 aaKnown RBP24.72■■□□□ 1.55
TRAF4-207ENST00000461195 DSC1Q08554 894 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 DUSP6Q16828 381 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 TAS1R3Q7RTX0 852 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 VPS52Q8N1B4 723 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 LINC00301Q8NCQ3 95 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 TMEM161BQ8NDZ6 487 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 GSTCDQ8NEC7 633 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 BCL7CQ8WUZ0 217 aaPredicted RBP24.72■■□□□ 1.55
TRAF4-207ENST00000461195 ACO2Q99798 780 aaKnown RBP24.72■■□□□ 1.55
TRAF4-207ENST00000461195 TFIP11Q9UBB9 837 aaKnown RBP24.72■■□□□ 1.55
TRAF4-207ENST00000461195 STK17AQ9UEE5 414 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 STK39Q9UEW8 545 aa24.72■■□□□ 1.55
TRAF4-207ENST00000461195 HIDE1A8MVS5 230 aa24.71■■□□□ 1.55
TRAF4-207ENST00000461195 TBX10O75333 385 aa24.71■■□□□ 1.55
TRAF4-207ENST00000461195 OR1G1P47890 313 aa24.71■■□□□ 1.55
TRAF4-207ENST00000461195 NDUFV1P49821 464 aa24.71■■□□□ 1.55
TRAF4-207ENST00000461195 DLX2Q07687 328 aaPredicted RBP24.71■■□□□ 1.55
TRAF4-207ENST00000461195 GRIK3Q13003 919 aa24.71■■□□□ 1.55
TRAF4-207ENST00000461195 STRN3Q13033 797 aa24.71■■□□□ 1.55
TRAF4-207ENST00000461195 RRAGBQ5VZM2 374 aa24.71■■□□□ 1.55
TRAF4-207ENST00000461195 PTCRAQ6ISU1 281 aaPredicted RBP24.71■■□□□ 1.55
TRAF4-207ENST00000461195 MRPL43Q8N983 215 aaKnown RBP24.71■■□□□ 1.55
TRAF4-207ENST00000461195 H0YCG3 227 aa24.7■■□□□ 1.54
TRAF4-207ENST00000461195 SPTLC2O15270 562 aa24.7■■□□□ 1.54
TRAF4-207ENST00000461195 NR1I2O75469 434 aa24.7■■□□□ 1.54
TRAF4-207ENST00000461195 RECQL4O94761 1208 aa24.7■■□□□ 1.54
TRAF4-207ENST00000461195 FAM13AO94988 1023 aa24.7■■□□□ 1.54
TRAF4-207ENST00000461195 GIT2Q14161 759 aa24.7■■□□□ 1.54
TRAF4-207ENST00000461195 TARS2Q9BW92 718 aaKnown RBP24.7■■□□□ 1.54
TRAF4-207ENST00000461195 ZBP1Q9H171 429 aa24.7■■□□□ 1.54
TRAF4-207ENST00000461195 PRG3Q9Y2Y8 225 aaPredicted RBP24.7■■□□□ 1.54
TRAF4-207ENST00000461195 GRXCR2A6NFK2 248 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 C2orf71A6NGG8 1288 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 PPP6R2O75170 966 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 YEATS4O95619 227 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 CXCL14O95715 111 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 MAPTP10636 758 aaKnown RBP24.69■■□□□ 1.54
TRAF4-207ENST00000461195 ZNF131P52739 623 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 NCKAP1LP55160 1127 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 ZNF568Q3ZCX4 644 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 MYCT1Q8N699 235 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 PARVGQ9HBI0 331 aa24.69■■□□□ 1.54
TRAF4-207ENST00000461195 PTPRHQ9HD43 1115 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms