RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GTF2IRD2Q86UP8 949 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 GGNQ86UU5 652 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 TICAM2Q86XR7 235 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 ADGRG2Q8IZP9 1017 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 AHI1Q8N157 1196 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 CARFQ8N187 725 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 TBC1D16Q8TBP0 767 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 CCDC140Q96MF4 163 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 MPHOSPH8Q99549 860 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 TAOK3Q9H2K8 898 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 DBNDD1Q9H9R9 158 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 TRIM39Q9HCM9 518 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 USP40Q9NVE5 1235 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 RNF181Q9P0P0 153 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 DDX19BQ9UMR2 479 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 RWDD3Q9Y3V2 267 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 RIPOR2Q9Y4F9 1068 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 LRRC37AA6NMS7 1700 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 LTBP1Q14766 1721 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 ZNF541Q9H0D2 1346 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 BLACEA4D250 179 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 YDJCA8MPS7 323 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 ALG1L2C9J202 215 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 EYA2O00167 538 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 PPIP5K2O43314 1243 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 NOBOXO60393 691 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 PPP1R11O60927 126 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 EFCAB14O75071 495 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 SURF6O75683 361 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 RAD17O75943 681 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 IGHDP01880 384 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 PAMP19021 973 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 HOXC12P31275 282 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 GYG1P46976 350 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 GFRA1P56159 465 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 TIMM10P62072 90 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 HABP4Q5JVS0 413 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 METTL24Q5JXM2 366 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 ODR4Q5SWX8 454 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 UBXN11Q5T124 520 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 WWC2Q6AWC2 1192 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 AFAP1L2Q8N4X5 818 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 VGLL2Q8N8G2 317 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 ATL2Q8NHH9 583 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 SSH3Q8TE77 659 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 LEO1Q8WVC0 666 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 JDP2Q8WYK2 163 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 KCTD13Q8WZ19 329 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 CDC5LQ99459 802 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 CHMP4BQ9H444 224 aaKnown RBP5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 IL1RAPL2Q9NP60 686 aa5.72□□□□□ -1.49
ATPAF1-203ENST00000460928 NPHP3-ACAD11A0A0J9YXS1 232 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 DDNO94850 711 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 CPEP16870 476 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 MCCP23508 829 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 IARSP41252 1262 aaKnown RBP5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 KCNJ6P48051 423 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 MMP14P50281 582 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 TERF1P54274 439 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 MAP4K2Q12851 820 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 MTX1Q13505 466 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 DPY19L1Q2PZI1 675 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 BRAPQ7Z569 592 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 FGD2Q7Z6J4 655 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 STRA8Q7Z7C7 330 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 PPM1KQ8N3J5 372 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 LINC00482Q8N8I6 264 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 SLC17A8Q8NDX2 589 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 GSTCDQ8NEC7 633 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 OTUD7AQ8TE49 926 aaPredicted RBP5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 PTPRN2Q92932 1015 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 NKX2-4Q9H2Z4 354 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 CYP26B1Q9NR63 512 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 NTMQ9P121 344 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 GULP1Q9UBP9 304 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 TNPO3Q9Y5L0 923 aaKnown RBP5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 ZNF804BA4D1E1 1349 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 XDHP47989 1333 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 TIAM2Q8IVF5 1701 aa5.71□□□□□ -1.5
ATPAF1-203ENST00000460928 C7orf72A4D263 438 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 K7ESM1 405 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 OPA1O60313 960 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 ECE2O60344 883 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 NPHS1O60500 1241 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 KIF20AO95235 890 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 NPTXRO95502 500 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 CPP00450 1065 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 ASLP04424 464 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 SNRPB2P08579 225 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 POU3F2P20265 443 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 PHKA1P46020 1223 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 KCNJ4P48050 445 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 NEK4P51957 841 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 SOX10P56693 466 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 GJA9P57773 515 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 G3BP1Q13283 466 aaKnown RBP eCLIP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms