RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ECM1Q16610 540 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 MTERF2Q49AM1 385 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 NOMO2Q5JPE7 1267 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 MCTP1Q6DN14 999 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 GLB1LQ6UWU2 654 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 LRRC71Q8N4P6 559 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 MMTAG2Q9BU76 263 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 TBC1D17Q9HA65 648 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 SLC2A4RGQ9NR83 387 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 DPP7Q9UHL4 492 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 R4GN57 208 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 PATJQ8NI35 1801 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 DNAH14Q0VDD8 3507 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 CLUHO75153 1309 aa15.17■□□□□ 0.02
SCAMP4-206ENST00000460767 EP300Q09472 2414 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 DDX11L8A8MPP1 907 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 MARCH6O60337 910 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 CNPP09543 421 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 SP9P0CG40 484 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 SDHBP21912 280 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 SFPQP23246 707 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 ELMSAN1Q6PJG2 1045 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 TRMT1LQ7Z2T5 733 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 SLC44A3Q8N4M1 653 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 SUMF1Q8NBK3 374 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 HDAC7Q8WUI4 952 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 TMEM175Q9BSA9 504 aa15.16■□□□□ 0.02
SCAMP4-206ENST00000460767 KMT2BQ9UMN6 2715 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 OFD1O75665 1012 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 CFHP08603 1231 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 KLRC2P26717 231 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 RFC5P40937 340 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 SLC11A1P49279 550 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 PTPAQ15257 358 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 ZNF528Q3MIS6 628 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 HYIQ5T013 277 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 ZNF410Q86VK4 478 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 C1orf210Q8IVY1 113 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 TPH2Q8IWU9 490 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 RNF168Q8IYW5 571 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 GPR161Q8N6U8 529 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 NLRP7Q8WX94 980 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 CEP170P1Q96L14 293 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 GCOM2Q9BZD3 368 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 INO80BQ9C086 356 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 IFT122Q9HBG6 1241 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 ARHGEF3Q9NR81 526 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 FAM105AQ9NUU6 356 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 SSX2IPQ9Y2D8 614 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 DMXL1Q9Y485 3027 aa15.15■□□□□ 0.02
SCAMP4-206ENST00000460767 CACNA1BQ00975 2339 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 ANHXE9PGG2 379 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 SPTLC1O15269 473 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 STX6O43752 255 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 GAS2O43903 313 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 EFEMP2O95967 443 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 SOD2P04179 222 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 OTUD6AQ7L8S5 288 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 HSCBQ8IWL3 235 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 EXOC8Q8IYI6 725 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 PJA1Q8NG27 643 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 SCLT1Q96NL6 688 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 JPH2Q9BR39 696 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 HERC2P3Q9BVR0 1158 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 MAN1C1Q9NR34 630 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 MRPL17Q9NRX2 175 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 DNAJB4Q9UDY4 337 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 SIT1Q9Y3P8 196 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 CNTNAP2Q9UHC6 1331 aa15.14■□□□□ 0.01
SCAMP4-206ENST00000460767 MIA3Q5JRA6 1907 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 PP2D1A8MPX8 630 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 B4GALT3O60512 393 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 DGAT1O75907 488 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 ADH1AP07327 375 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 FGFR4P22455 802 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 RFX1P22670 979 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 ARL2P36404 184 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 STARD6P59095 220 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 RNASELQ05823 741 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 EMC2Q15006 297 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 TWF2Q6IBS0 349 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 POTEGQ6S5H5 508 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 IFNLR1Q8IU57 520 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 GPR65Q8IYL9 337 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 GPR152Q8TDT2 470 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 PIGOQ8TEQ8 1089 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 SLC7A3Q8WY07 619 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 RIN2Q8WYP3 895 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 PGBD4Q96DM1 585 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 CNTNAP3BQ96NU0 1288 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 NACC1Q96RE7 527 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 CNTNAP3Q9BZ76 1288 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.13■□□□□ 0.017e-7■□□□□ 9.9
SCAMP4-206ENST00000460767 LRWD1Q9UFC0 647 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 FBXO4Q9UKT5 387 aa15.13■□□□□ 0.01
SCAMP4-206ENST00000460767 MTCL1Q9Y4B5 1905 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms