RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ADAM21Q9UKJ8 722 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 HIST1H2AGP0C0S8 130 aaPredicted RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 PHKG2P15735 406 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 KCNA2P16389 499 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 HIST1H2ADP20671 130 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 CHRNA3P32297 505 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 RIBC1Q8N443 379 aaPredicted RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 HIST1H2AHQ96KK5 128 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 SPATA17Q96L03 361 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 HIST1H2AJQ99878 128 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 H2AFJQ9BTM1 129 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 WNT8AQ9H1J5 351 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ATP11BQ9Y2G3 1177 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 APOL1O14791 398 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ACSL3O95573 720 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ANXA11P50995 505 aaKnown RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 DHX34Q14147 1143 aaKnown RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 STILQ15468 1287 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ARMCX6Q7L4S7 300 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 RMDN1Q96DB5 314 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ZNF496Q96IT1 587 aaPredicted RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 NDST4Q9H3R1 872 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 SESN1Q9Y6P5 492 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ERVV-1B6SEH8 477 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 TRIM8Q9BZR9 551 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 NDFIP2Q9NV92 336 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 INTUQ9ULD6 942 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 CFAP69A5D8W1 941 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 ZNF568Q3ZCX4 644 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 SDE2Q6IQ49 451 aa9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 MRPL4Q9BYD3 311 aaKnown RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 PAPOLBQ9NRJ5 636 aaKnown RBP9.39□□□□□ -0.91
SHROOM4-203ENST00000460112 GPC5P78333 572 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 RUNX1T1Q06455 604 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 SCRN1Q12765 414 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 POTEAQ6S8J7 498 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 ZNF302Q9NR11 478 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 TK2O00142 265 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 ZRANB2O95218 330 aaKnown RBP eCLIP9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 PLCG1P19174 1290 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 CDK17Q00537 523 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 APOA5Q6Q788 366 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 BBS7Q8IWZ6 715 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 DDIASQ8IXT1 998 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 XXYLT1Q8NBI6 393 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 COA1Q9GZY4 146 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 NGRNQ9NPE2 291 aaKnown RBP9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 ADA2Q9NZK5 511 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 MAD2L2Q9UI95 211 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 ZNF521Q96K83 1311 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 VCPP55072 806 aaKnown RBP9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 TP53BP2Q13625 1128 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 TRIM71Q2Q1W2 868 aaKnown RBP9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 VPS50Q96JG6 964 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 TNIP3Q96KP6 325 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 SMARCAD1Q9H4L7 1026 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 PCIF1Q9H4Z3 704 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 STN1Q9H668 368 aaKnown RBP9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 TMEM51Q9NW97 253 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 CAB39Q9Y376 341 aaPredicted RBP9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 PJA2O43164 708 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 HAUS5O94927 633 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 PPARDQ03181 441 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 ACCSLQ4AC99 568 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 LUZP2Q86TE4 346 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 H2AFY2Q9P0M6 372 aaPredicted RBP9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 CLIC4Q9Y696 253 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 MYH7BA7E2Y1 1941 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 CIAPIN1Q6FI81 312 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 ARMC6Q6NXE6 501 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 GPT2Q8TD30 523 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 AIPL1Q9NZN9 384 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 SEPT3Q9UH03 358 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 ANAPC7Q9UJX3 599 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 CYP2C19P33261 490 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 RGS9BPQ6ZS82 235 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 UNC13DQ70J99 1090 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 SCN4BQ8IWT1 228 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 SH3GL2Q99962 352 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 STKLD1Q8NE28 680 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 PIGSQ96S52 555 aa9.38□□□□□ -0.91
SHROOM4-203ENST00000460112 M0QYV0 167 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 DIAPH2O60879 1101 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 C16orf89Q6UX73 402 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 PLD3Q8IV08 490 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 NSUN6Q8TEA1 469 aaKnown RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 NMRK1Q9NWW6 199 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SMG5Q9UPR3 1016 aaKnown RBP9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 PLAAQ9Y263 795 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 FAM187AA6NFU0 413 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 SLCO1A2P46721 670 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 EFNA5P52803 228 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 ZNF827Q17R98 1081 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 DYDC2Q96IM9 177 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 ZNF341Q9BYN7 854 aa9.37□□□□□ -0.91
SHROOM4-203ENST00000460112 CCDC90BQ9GZT6 254 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms