RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CYP1A2P05177 515 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 POTEJP0CG39 1038 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 SCP2P22307 547 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 NMT1P30419 496 aaKnown RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 SLC8A1P32418 973 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 HPDP32754 393 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 GTF2H1P32780 548 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 FLT3P36888 993 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 DNA2P51530 1060 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 VAMP7P51809 220 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 MNAT1P51948 309 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 STAT2P52630 851 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 RBM5P52756 815 aaKnown RBP eCLIP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 MFAP3P55082 362 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 RNASE9P60153 205 aaKnown RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 GTF2BQ00403 316 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 NFIAQ12857 509 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 IFT88Q13099 833 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 RIPK1Q13546 671 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 RASA3Q14644 834 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 CEP55Q53EZ4 464 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 EAPPQ56P03 285 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 ANKRD20A8PQ5CZ79 823 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 ODR4Q5SWX8 454 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 WLSQ5T9L3 541 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 RNF187Q5TA31 235 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 TTC19Q6DKK2 380 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 PHLDB3Q6NSJ2 640 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 PPP1R2P3Q6NXS1 205 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 ZDHHC24Q6UX98 284 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 ENOSF1Q7L5Y1 443 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 SH3BP5LQ7L8J4 393 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 CPLX4Q7Z7G2 160 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 TPH2Q8IWU9 490 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 FAM71AQ8IYT1 594 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 GBP7Q8N8V2 638 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 CCDC197Q8NCU1 140 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 TMC2Q8TDI7 906 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 ZNF526Q8TF50 670 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 ART4Q93070 314 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 ZFP91Q96JP5 570 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 SERPINB12Q96P63 405 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 WDR18Q9BV38 432 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 MOV10L1Q9BXT6 1211 aaKnown RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 OSBPL7Q9BZF2 842 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 FOXP3Q9BZS1 431 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 NSRP1Q9H0G5 558 aaKnown RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 THAP2Q9H0W7 228 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 EPB41L4BQ9H329 900 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 LRRC19Q9H756 370 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 GOPCQ9HD26 462 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 OSGEPQ9NPF4 335 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 CREBZFQ9NS37 354 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 HOMER3Q9NSC5 361 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 GRHL1Q9NZI5 618 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 WHRNQ9P202 907 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 CNOT8Q9UFF9 292 aaKnown RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 GTF3C4Q9UKN8 822 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 TRPC6Q9Y210 931 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 TMX2Q9Y320 296 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 RPTORQ8N122 1335 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 IGSF9BQ9UPX0 1349 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 A0A1B0GUA9 196 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ARHGEF35A5YM69 484 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 TMEM88BA6NKF7 163 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 F8W031 263 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 NDC80O14777 642 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 RGS16O15492 202 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 MGRN1O60291 552 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 TBC1D12O60347 775 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 EXOC3O60645 756 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ZC3H11AO75152 810 aaKnown RBP eCLIP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CAND2O75155 1236 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ITGBL1O95965 494 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 FTLP02792 175 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 P4HBP07237 508 aaKnown RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ITIH2P19823 946 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 RDXP35241 583 aaKnown RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 COILP38432 576 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 SLC1A1P43005 524 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 NCKAP1LP55160 1127 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CYP4A11Q02928 519 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 KCNA1Q09470 495 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 PTP4A2Q12974 167 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 MKRN3Q13064 507 aaKnown RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 SPDYE2Q495Y8 402 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 PREPLQ4J6C6 727 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CBWD6Q4V339 395 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CBWD3Q5JTY5 395 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CBWD5Q5RIA9 395 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 FBXW10Q5XX13 1052 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 GJB7Q6PEY0 223 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CRELD2Q6UXH1 353 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 USP37Q86T82 979 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 SLC51AQ86UW1 340 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ZNF677Q86XU0 584 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 SLC13A5Q86YT5 568 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 RELL1Q8IUW5 271 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ZFPM1Q8IX07 1006 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms