RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 CSRNP2Q9H175 543 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 FOXP1Q9H334 677 aaPredicted RBP17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 FBXL21Q9UKT6 434 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 PRG3Q9Y2Y8 225 aaPredicted RBP17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 MED19A0JLT2 244 aaPredicted RBP17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 B4GALT3O60512 393 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 MED24O75448 989 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 ALDH2P05091 517 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 OR1G1P47890 313 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 AFF1P51825 1210 aaKnown RBP17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 ORC2Q13416 577 aaPredicted RBP17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 POTEGQ6S5H5 508 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 CATSPER3Q86XQ3 398 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 ZBTB8OSQ8IWT0 167 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 ZDHHC14Q8IZN3 488 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 SIX5Q8N196 739 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 MCPH1Q8NEM0 835 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 NACC1Q96RE7 527 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 GAD1Q99259 594 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 GPRC5CQ9NQ84 441 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 DZANK1Q9NVP4 752 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 STK39Q9UEW8 545 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 HES2Q9Y543 173 aa17.45■□□□□ 0.38
CHCHD3-204ENST00000457942 ARHGEF35A5YM69 484 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 NR1I2O75469 434 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 NPTXRO95502 500 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 SPATA31C1P0DKV0 1188 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 ARF4P18085 180 aaPredicted RBP17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 SCNN1GP51170 649 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 CLCN5P51795 746 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 POU5F1BQ06416 359 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 PTPN14Q15678 1187 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 HAUS3Q68CZ6 603 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 CDR2LQ86X02 465 aaPredicted RBP17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 IFNLR1Q8IU57 520 aaPredicted RBP17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 NOSTRINQ8IVI9 506 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 CCDC105Q8IYK2 499 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 EMILIN2Q9BXX0 1053 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 MYO10Q9HD67 2058 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 DNAH14Q0VDD8 3507 aa17.44■□□□□ 0.38
CHCHD3-204ENST00000457942 ARL5CA6NH57 179 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 STK25O00506 426 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 C2CD2LO14523 706 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 NRP1O14786 923 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 B4GALT5O43286 388 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 NARSO43776 548 aaKnown RBP17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 URODP06132 367 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 NPR3P17342 541 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 LIG1P18858 919 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 AOC1P19801 751 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 KLRC2P26717 231 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 CCT6AP40227 531 aaKnown RBP17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 AMHR2Q16671 573 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 ATAT1Q5SQI0 421 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 SLC27A1Q6PCB7 646 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 CABP7Q86V35 215 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 PPFIBP1Q86W92 1011 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 KIAA2013Q8IYS2 634 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 RIN2Q8WYP3 895 aaPredicted RBP17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 RMDN1Q96DB5 314 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 RPS6KC1Q96S38 1066 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 HINFPQ9BQA5 517 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 POLR3CQ9BUI4 534 aaPredicted RBP17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 VN1R3Q9BXE9 311 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 NFKBIZQ9BYH8 718 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 MRPL17Q9NRX2 175 aaKnown RBP17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 PARP2Q9UGN5 583 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 IRAK3Q9Y616 596 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 R4GN57 208 aa17.43■□□□□ 0.38
CHCHD3-204ENST00000457942 RFX1P22670 979 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 AKAP5P24588 427 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 TRAPPC10P48553 1259 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 NBR1Q14596 966 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 C8orf34Q49A92 452 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 PADI6Q6TGC4 694 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 CCDC149Q6ZUS6 474 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 DTWD2Q8NBA8 298 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 ZFP42Q96MM3 310 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 PRMT7Q9NVM4 692 aaPredicted RBP17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 GIT1Q9Y2X7 761 aa17.42■□□□□ 0.38
CHCHD3-204ENST00000457942 CFHP08603 1231 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 MYBP10242 640 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 RPA1P27694 616 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 COLGALT2Q8IYK4 626 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 PLCD3Q8N3E9 789 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 DEPTORQ8TB45 409 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 HERC2P3Q9BVR0 1158 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 RAB34Q9BZG1 259 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 C2orf40Q9H1Z8 148 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 KLK14Q9P0G3 267 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 KIF3AQ9Y496 699 aa17.41■□□□□ 0.38
CHCHD3-204ENST00000457942 SOD2P04179 222 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 TDGQ13569 410 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 SPECC1Q5M775 1068 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms