RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 DDX25Q9UHL0 483 aaKnown RBP16.03■□□□□ 0.16
UPF3AP2-201ENST00000457924 CA14Q9ULX7 337 aa16.03■□□□□ 0.16
UPF3AP2-201ENST00000457924 PPME1Q9Y570 386 aa16.03■□□□□ 0.16
UPF3AP2-201ENST00000457924 MTCL1Q9Y4B5 1905 aaKnown RBP16.03■□□□□ 0.16
UPF3AP2-201ENST00000457924 TDRD15B5MCY1 1934 aaKnown RBP16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 NR1I2O75469 434 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 ERLIN2O94905 339 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 MYBP10242 640 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 HOXA11P31270 313 aaPredicted RBP16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 RFC5P40937 340 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 NPEPPSP55786 919 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 CCT2P78371 535 aaKnown RBP16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 TAS1R1Q7RTX1 841 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 BLIDQ8IZY5 108 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 HDAC7Q8WUI4 952 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 TMEM143Q96AN5 459 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 MBOAT7Q96N66 472 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 MINDY3Q9H8M7 445 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 TBC1D17Q9HA65 648 aa16.02■□□□□ 0.16
UPF3AP2-201ENST00000457924 VPS13AQ96RL7 3174 aa16.02■□□□□ 0.15
UPF3AP2-201ENST00000457924 DOCK8Q8NF50 2099 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 EML1O00423 815 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 ASAP2O43150 1006 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 RFPL2O75678 378 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 RPS6KB1P23443 525 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 PDIA3P30101 505 aaKnown RBP16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 SSRP1Q08945 709 aaKnown RBP16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 LAMTOR4Q0VGL1 99 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 PTGDRQ13258 359 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 SPECC1Q5M775 1068 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 KIAA0319Q5VV43 1072 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 SMG8Q8ND04 991 aaKnown RBP16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 TCP11Q8WWU5 503 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 RIN2Q8WYP3 895 aaPredicted RBP16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 MYADMQ96S97 322 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 SLC4A5Q9BY07 1137 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 AGXT2Q9BYV1 514 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 DHX33Q9H6R0 707 aaKnown RBP16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 RXFP1Q9HBX9 757 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 NCOA5Q9HCD5 579 aaKnown RBP16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 IPPQ9Y573 584 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 SNX14Q9Y5W7 946 aa16.01■□□□□ 0.15
UPF3AP2-201ENST00000457924 ARL5CA6NH57 179 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 GPR37O15354 613 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 GAS2O43903 313 aaKnown RBP16■□□□□ 0.15
UPF3AP2-201ENST00000457924 C1RP00736 705 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 P4HBP07237 508 aaKnown RBP16■□□□□ 0.15
UPF3AP2-201ENST00000457924 SPATA31D3P0C874 917 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 PSMA5P28066 241 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 HSPA4P34932 840 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 DSG1Q02413 1049 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
UPF3AP2-201ENST00000457924 PPP2R5CQ13362 524 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 PCBP1Q15365 356 aaKnown RBP eCLIP16■□□□□ 0.15
UPF3AP2-201ENST00000457924 ZC3H14Q6PJT7 736 aaKnown RBP16■□□□□ 0.15
UPF3AP2-201ENST00000457924 SPATA31D4Q6ZUB0 917 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 PALB2Q86YC2 1186 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 RNF168Q8IYW5 571 aaPredicted RBP16■□□□□ 0.15
UPF3AP2-201ENST00000457924 RNF149Q8NC42 400 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 GPR152Q8TDT2 470 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 GAD1Q99259 594 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 HINFPQ9BQA5 517 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 COLEC11Q9BWP8 271 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 PLEKHA4Q9H4M7 779 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 SIT1Q9Y3P8 196 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 R4GN57 208 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 DCHS1Q96JQ0 3298 aa16■□□□□ 0.15
UPF3AP2-201ENST00000457924 M0R2N6 131 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 SLC37A4O43826 429 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 DEXIO95424 95 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 EFEMP2O95967 443 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 LAMP2P13473 410 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 AXLP30530 894 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 MLH1P40692 756 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 EVCP57679 992 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 DSC1Q08554 894 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 EMC2Q15006 297 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 INF2Q27J81 1249 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 GALNT17Q6IS24 598 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 PHLDB3Q6NSJ2 640 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 NOTUMQ6P988 496 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 GET4Q7L5D6 327 aaPredicted RBP15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 OTUD6AQ7L8S5 288 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 KRT25Q7Z3Z0 450 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 FERMT3Q86UX7 667 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 KIAA2013Q8IYS2 634 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 DAGLBQ8NCG7 672 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 ZNF707Q96C28 371 aaPredicted RBP15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 CCDC51Q96ER9 411 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 FAM20AQ96MK3 541 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 NT5C3AQ9H0P0 336 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 ARHGEF3Q9NR81 526 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 ZDHHC7Q9NXF8 308 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 VAV3Q9UKW4 847 aa15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 EP300Q09472 2414 aaPredicted RBP15.99■□□□□ 0.15
UPF3AP2-201ENST00000457924 CPLX1O14810 134 aa15.98■□□□□ 0.15
UPF3AP2-201ENST00000457924 PAPLNO95428 1278 aa15.98■□□□□ 0.15
UPF3AP2-201ENST00000457924 DCNP07585 359 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms