RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 GTPBP10A4D1E9 387 aaKnown RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 MIF4GDA9UHW6 222 aaKnown RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SPAG7O75391 227 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 HSPA6P17066 643 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 RPL13P26373 211 aaKnown RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 ATP5DP30049 168 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 MKRN3Q13064 507 aaKnown RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 CLUL1Q15846 466 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 CYP1B1Q16678 543 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 ZC2HC1CQ53FD0 456 aaPredicted RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 PHLDB3Q6NSJ2 640 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 C16orf86Q6ZW13 317 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 FAM186BQ8IYM0 893 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 ADGRF4Q8IZF3 695 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 AGGF1Q8N302 714 aaeCLIP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 C7orf43Q8WVR3 580 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 JMJD4Q9H9V9 463 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 NKIRAS1Q9NYS0 192 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 ASIC3Q9UHC3 531 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 E7ENQ6 273 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 CLDN3O15551 220 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 THAP12O43422 761 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 ACADSP16219 412 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 VPS41P49754 854 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 YARSP54577 528 aaKnown RBP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 RPS8P62241 208 aaKnown RBP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 CYP4A11Q02928 519 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 TRAF1Q13077 416 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 ITPK1Q13572 414 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 LBRQ14739 615 aaKnown RBP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 MUM1Q2TAK8 710 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 FOXB2Q5VYV0 432 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 C11orf63Q6NUN7 778 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 RNF207Q6ZRF8 634 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 SMIM5Q71RC9 77 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 CADPS2Q86UW7 1296 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 RHOT2Q8IXI1 618 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 ENDOVQ8N8Q3 282 aaKnown RBP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 ATG4AQ8WYN0 398 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 NMRK1Q9NWW6 199 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 PHTF1Q9UMS5 762 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 PHLPP1O60346 1717 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 FRMPD4Q14CM0 1322 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 hCG_1984214I3L0E3 225 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 BAG3O95817 575 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 SPATA31C1P0DKV0 1188 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 ALDH3A1P30838 453 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 POLE2P56282 527 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 STRN3Q13033 797 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 KHDC1Q4VXA5 237 aaKnown RBP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 OR52E8Q6IFG1 317 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 RFWD3Q6PCD5 774 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 RHBDF2Q6PJF5 856 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 BRINP3Q76B58 766 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 ZNF713Q8N859 430 aaPredicted RBP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 FAM136AQ96C01 138 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 AGPAT1Q99943 283 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 INTS2Q9H0H0 1204 aaKnown RBP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 BHMT2Q9H2M3 363 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 ZNF287Q9HBT7 754 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 ACP6Q9NPH0 428 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLIP4-208ENST00000456385 IRAK4Q9NWZ3 460 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 APEX2Q9UBZ4 518 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 MTUS1Q9ULD2 1270 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 NUMBLQ9Y6R0 609 aa11.03□□□□□ -0.64
CLIP4-208ENST00000456385 MYO3BQ8WXR4 1341 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 PNMA6FA0A0J9YX94 578 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 RASA4BC9J798 803 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 RASA4O43374 803 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 TOM1O60784 492 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 LGR5O75473 907 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 IVDP26440 423 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 CNGA1P29973 690 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 NMT1P30419 496 aaKnown RBP11.02□□□□□ -0.64
CLIP4-208ENST00000456385 PSMC2P35998 433 aaKnown RBP11.02□□□□□ -0.64
CLIP4-208ENST00000456385 GCLCP48506 637 aaPredicted RBP11.02□□□□□ -0.64
CLIP4-208ENST00000456385 NT5C2P49902 561 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 ITGA8P53708 1063 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 MOGSQ13724 837 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 SLC5A9Q2M3M2 681 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.64
CLIP4-208ENST00000456385 SYT2Q8N9I0 419 aaPredicted RBP11.02□□□□□ -0.64
CLIP4-208ENST00000456385 RDH13Q8NBN7 331 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 CD101Q93033 1021 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 MXD3Q9BW11 206 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 METTL5Q9NRN9 209 aaKnown RBP11.02□□□□□ -0.64
CLIP4-208ENST00000456385 CHST7Q9NS84 486 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 NINJ2Q9NZG7 142 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 GRID1Q9ULK0 1009 aa11.02□□□□□ -0.64
CLIP4-208ENST00000456385 ZMYM2Q9UBW7 1377 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 ADGRA3Q8IWK6 1321 aa11.02□□□□□ -0.65
CLIP4-208ENST00000456385 SMAPO00193 183 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms