RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 MAPK13O15264 365 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 PECAM1P16284 738 aaPredicted RBP14.68□□□□□ -0.06
PTPRE-204ENST00000455661 ATP6V1C1P21283 382 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 ALDH3A1P30838 453 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 POLGP54098 1239 aaPredicted RBP14.68□□□□□ -0.06
PTPRE-204ENST00000455661 MXRA7P84157 204 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 CAV1Q03135 178 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 MPP2Q14168 576 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 TSNAXIP1Q2TAA8 658 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 CMPK2Q5EBM0 449 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 TBC1D9BQ66K14 1250 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 DPP8Q6V1X1 898 aaPredicted RBP14.68□□□□□ -0.06
PTPRE-204ENST00000455661 NBPF5PQ86XG9 351 aaPredicted RBP14.68□□□□□ -0.06
PTPRE-204ENST00000455661 SLF2Q8IX21 1173 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 SLC20A1Q8WUM9 679 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 SLCO2A1Q92959 643 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 UTP4Q969X6 686 aaKnown RBP14.68□□□□□ -0.06
PTPRE-204ENST00000455661 SNF8Q96H20 258 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 TMEM237Q96Q45 408 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 LRRC37BQ96QE4 947 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 DNAJC18Q9H819 358 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 AAASQ9NRG9 546 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 ACTL7BQ9Y614 415 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 SFI1A8K8P3 1242 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 SMIM24O75264 130 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 CDH16O75309 829 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 TAC1P20366 129 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 KYNUQ16719 465 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 ANO7Q6IWH7 933 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 STXBP4Q6ZWJ1 553 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 SRRM1Q8IYB3 904 aaKnown RBP14.67□□□□□ -0.06
PTPRE-204ENST00000455661 ETNPPLQ8TBG4 499 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 C7orf43Q8WVR3 580 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 ERP27Q96DN0 273 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 LGALS13Q9UHV8 139 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 STARD13Q9Y3M8 1113 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 USH1CQ9Y6N9 552 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 DPPA5A6NC42 116 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 PEX11AO75192 247 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 DCTN3O75935 186 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 MTA2O94776 668 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 TRIM49P0CI25 452 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 TRIM49CP0CI26 452 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 AKR1B1P15121 316 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 MAN1A1P33908 653 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 CHKAP35790 457 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 SIX1Q15475 284 aaPredicted RBP14.67□□□□□ -0.06
PTPRE-204ENST00000455661 SGO2Q562F6 1265 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 THEMIS2Q5TEJ8 643 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 PHLDB3Q6NSJ2 640 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 SYDE1Q6ZW31 735 aaPredicted RBP14.67□□□□□ -0.06
PTPRE-204ENST00000455661 RPUSD2Q8IZ73 545 aaKnown RBP14.67□□□□□ -0.06
PTPRE-204ENST00000455661 SLC17A8Q8NDX2 589 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 CD101Q93033 1021 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 FAM20AQ96MK3 541 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 NUDCD1Q96RS6 583 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 CRAMP1Q96RY5 1269 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 SETDB2Q96T68 719 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 POP1Q99575 1024 aaKnown RBP14.67□□□□□ -0.06
PTPRE-204ENST00000455661 PAIP2Q9BPZ3 127 aaKnown RBP14.67□□□□□ -0.06
PTPRE-204ENST00000455661 ETAA1Q9NY74 926 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 TBK1Q9UHD2 729 aa14.67□□□□□ -0.06
PTPRE-204ENST00000455661 EIF4E1BA6NMX2 242 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 FOXO6A8MYZ6 492 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 TPBGLP0DKB5 382 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 DLATP10515 647 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 NMT1P30419 496 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 CYP2J2P51589 502 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 YARSP54577 528 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 ARHGAP4P98171 946 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 CYP4A11Q02928 519 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 CETN1Q12798 172 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 AP3B2Q13367 1082 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 Q4G0T1 1027 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 WASHC2DQ5SRD0 308 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 RHBDF2Q6PJF5 856 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 FAM47EQ6ZV65 393 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 MAEAQ7L5Y9 396 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 ANKLE1Q8NAG6 615 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 UBE2TQ9NPD8 197 aaPredicted RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 HAO1Q9UJM8 370 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 NAALADL1Q9UQQ1 740 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 PCDHA1Q9Y5I3 950 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 ZMYM2Q9UBW7 1377 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 ROBO1Q9Y6N7 1651 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 A0A1W2PRG0 241 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 ANKRD33BA6NCL7 494 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 LMNAP02545 664 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 TARSP26639 723 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 PAPOLAP51003 745 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 RHBDL3P58872 404 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 LBRQ14739 615 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 KCTD1Q719H9 257 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 LONP2Q86WA8 852 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 FBXO41Q8TF61 875 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 GRK7Q8WTQ7 553 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 MAIP1Q8WWC4 291 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 ANAPC5Q9UJX4 755 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms