RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TMEM169Q96HH4 297 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 ZNF396Q96N95 335 aaPredicted RBP27.37■■□□□ 1.97
MSH2-203ENST00000454849 TARS2Q9BW92 718 aaKnown RBP27.37■■□□□ 1.97
MSH2-203ENST00000454849 ZHX3Q9H4I2 956 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 ARHGAP28Q9P2N2 729 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 KANSL3Q9P2N6 904 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 CACNG4Q9UBN1 327 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 GIT1Q9Y2X7 761 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 PRG3Q9Y2Y8 225 aaPredicted RBP27.37■■□□□ 1.97
MSH2-203ENST00000454849 FSCN2O14926 492 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 F13A1P00488 732 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 KRT18P05783 430 aaKnown RBP27.36■■□□□ 1.97
MSH2-203ENST00000454849 LTBRP36941 435 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 ZBTB33Q86T24 672 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 KCTD17Q8N5Z5 321 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 LINC00301Q8NCQ3 95 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 IGSF21Q96ID5 467 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 ADPGKQ9BRR6 497 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 TIPINQ9BVW5 301 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 LZTS1Q9Y250 596 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 FAN1Q9Y2M0 1017 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 CUL9Q8IWT3 2517 aa27.36■■□□□ 1.97
MSH2-203ENST00000454849 F8W810 466 aa27.35■■□□□ 1.97
MSH2-203ENST00000454849 OR1G1P47890 313 aa27.35■■□□□ 1.97
MSH2-203ENST00000454849 VPS52Q8N1B4 723 aa27.35■■□□□ 1.97
MSH2-203ENST00000454849 GSTCDQ8NEC7 633 aa27.35■■□□□ 1.97
MSH2-203ENST00000454849 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.35■■□□□ 1.97
MSH2-203ENST00000454849 NRP1O14786 923 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 SPTLC2O15270 562 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 ALDH2P05091 517 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 DDIT3P35638 169 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 ADAM15Q13444 863 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 GIT2Q14161 759 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 RRAGBQ5VZM2 374 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 COLGALT2Q8IYK4 626 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 MYCT1Q8N699 235 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 TMEM161BQ8NDZ6 487 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 LARP4BQ92615 738 aaKnown RBP27.34■■□□□ 1.97
MSH2-203ENST00000454849 PPP2R3CQ969Q6 453 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 ACO2Q99798 780 aaKnown RBP27.34■■□□□ 1.97
MSH2-203ENST00000454849 VN1R3Q9BXE9 311 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 TMEM134Q9H6X4 195 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 CCDC39Q9UFE4 941 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 RBM19Q9Y4C8 960 aaKnown RBP27.34■■□□□ 1.97
MSH2-203ENST00000454849 TTC28Q96AY4 2481 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 PHLPP2Q6ZVD8 1323 aa27.34■■□□□ 1.97
MSH2-203ENST00000454849 A0A087X0B3 334 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 RECQL4O94761 1208 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 FAM13AO94988 1023 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 HARSP12081 509 aaKnown RBP27.33■■□□□ 1.97
MSH2-203ENST00000454849 OSTNP61366 133 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 COL19A1Q14993 1142 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 CTC1Q2NKJ3 1217 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 LEXMQ3ZCV2 418 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 PDILTQ8N807 584 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 SPIRE2Q8WWL2 714 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 RSPH1Q8WYR4 309 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 CHAMP1Q96JM3 812 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 ZBTB45Q96K62 511 aaPredicted RBP27.33■■□□□ 1.97
MSH2-203ENST00000454849 NTPCRQ9BSD7 190 aaKnown RBP27.33■■□□□ 1.97
MSH2-203ENST00000454849 MRPL4Q9BYD3 311 aaKnown RBP27.33■■□□□ 1.97
MSH2-203ENST00000454849 C17orf75Q9HAS0 396 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 KCND2Q9NZV8 630 aa27.33■■□□□ 1.97
MSH2-203ENST00000454849 TBX10O75333 385 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 CXCL14O95715 111 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 MAPTP10636 758 aaKnown RBP27.32■■□□□ 1.96
MSH2-203ENST00000454849 TXLNAP40222 546 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 NDUFV1P49821 464 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 SMTNP53814 917 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 LLGL2Q6P1M3 1020 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 DYMQ7RTS9 669 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 CEP120Q8N960 986 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 VN1R2Q8NFZ6 395 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 RPS6KC1Q96S38 1066 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 TCHPQ9BT92 498 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 BARX2Q9UMQ3 279 aaPredicted RBP27.32■■□□□ 1.96
MSH2-203ENST00000454849 TNFSF13BQ9Y275 285 aa27.32■■□□□ 1.96
MSH2-203ENST00000454849 INPPL1O15357 1258 aa27.31■■□□□ 1.96
MSH2-203ENST00000454849 ZNF568Q3ZCX4 644 aa27.31■■□□□ 1.96
MSH2-203ENST00000454849 PTCRAQ6ISU1 281 aaPredicted RBP27.31■■□□□ 1.96
MSH2-203ENST00000454849 DDX53Q86TM3 631 aaKnown RBP27.31■■□□□ 1.96
MSH2-203ENST00000454849 EFHBQ8N7U6 833 aa27.31■■□□□ 1.96
MSH2-203ENST00000454849 UHRF1Q96T88 793 aaPredicted RBP27.31■■□□□ 1.96
MSH2-203ENST00000454849 TMEM175Q9BSA9 504 aa27.31■■□□□ 1.96
MSH2-203ENST00000454849 CDT1Q9H211 546 aa27.31■■□□□ 1.96
MSH2-203ENST00000454849 NCK2O43639 380 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 GLP2RO95838 553 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 DNM1Q05193 864 aaKnown RBP27.3■■□□□ 1.96
MSH2-203ENST00000454849 DSC1Q08554 894 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 STRN3Q13033 797 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 DUSP6Q16828 381 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 DCAF4L1Q3SXM0 396 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 PDE12Q6L8Q7 609 aaKnown RBP27.3■■□□□ 1.96
MSH2-203ENST00000454849 TAS1R1Q7RTX1 841 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 MRPL43Q8N983 215 aaKnown RBP27.3■■□□□ 1.96
MSH2-203ENST00000454849 NGRNQ9NPE2 291 aaKnown RBP27.3■■□□□ 1.96
MSH2-203ENST00000454849 MARCH5Q9NX47 278 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 LARSQ9P2J5 1176 aaKnown RBP27.3■■□□□ 1.96
MSH2-203ENST00000454849 ODF2LQ9ULJ1 636 aa27.3■■□□□ 1.96
MSH2-203ENST00000454849 MYH11P35749 1972 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms