RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 KCNG1Q9UIX4 513 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 TGFB3P10600 412 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 CCNA1P78396 465 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 C1orf220Q5T0J3 134 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 DPP9Q86TI2 863 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 RBAKQ9NYW8 714 aaPredicted RBP14.75□□□□□ -0.05
CLK3-203ENST00000454830 KCNH4Q9UQ05 1017 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 PDHXO00330 501 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 FTLP02792 175 aaPredicted RBP14.74□□□□□ -0.05
CLK3-203ENST00000454830 GJA5P36382 358 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 TTLL4Q14679 1199 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 EPC2Q52LR7 807 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 GPRC5AQ8NFJ5 357 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 PCYT2Q99447 389 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 NTPCRQ9BSD7 190 aaKnown RBP14.74□□□□□ -0.05
CLK3-203ENST00000454830 ARHGAP28Q9P2N2 729 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 CLDN3O15551 220 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 GJB1P08034 283 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 PHLDB2Q86SQ0 1253 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 PNMA8AQ86V59 439 aaPredicted RBP14.74□□□□□ -0.05
CLK3-203ENST00000454830 SLC35G2Q8TBE7 412 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 PSPC1Q8WXF1 523 aaKnown RBP14.74□□□□□ -0.05
CLK3-203ENST00000454830 LRRC1Q9BTT6 524 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 THAP2Q9H0W7 228 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 DHX33Q9H6R0 707 aaKnown RBP14.74□□□□□ -0.05
CLK3-203ENST00000454830 P4HA2O15460 535 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 NAMPTP43490 491 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 TAS1R3Q7RTX0 852 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 ADAT2Q7Z6V5 191 aaKnown RBP14.74□□□□□ -0.05
CLK3-203ENST00000454830 SLC47A2Q86VL8 602 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 MROH8Q9H579 483 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 GINS2Q9Y248 185 aa14.74□□□□□ -0.05
CLK3-203ENST00000454830 PDE6CP51160 858 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 GPS2Q13227 327 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 MSANTD4Q8NCY6 345 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 LMO3Q8TAP4 145 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 FAM167AQ96KS9 214 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 RBM12Q9NTZ6 932 aaKnown RBP14.73□□□□□ -0.05
CLK3-203ENST00000454830 RLFQ13129 1914 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 ATMINO43313 823 aaPredicted RBP14.73□□□□□ -0.05
CLK3-203ENST00000454830 EXTL3O43909 919 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 TBC1D8O95759 1140 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 GARTP22102 1010 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 RFX1P22670 979 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 SSTR3P32745 418 aaPredicted RBP14.73□□□□□ -0.05
CLK3-203ENST00000454830 CAPSQ13938 189 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 ZBTB41Q5SVQ8 909 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 NAA35Q5VZE5 725 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 SPOPLQ6IQ16 392 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 THNSL1Q8IYQ7 743 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 TPCN2Q8NHX9 752 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 IFT81Q8WYA0 676 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 KRT12Q99456 494 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 AMFRQ9UKV5 643 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 RBBP6Q7Z6E9 1792 aaKnown RBP14.73□□□□□ -0.05
CLK3-203ENST00000454830 CSDE1O75534 798 aaKnown RBP14.73□□□□□ -0.05
CLK3-203ENST00000454830 RFC5P40937 340 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 CLCN3P51790 818 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 MAP9Q49MG5 647 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 HDXQ7Z353 690 aa14.73□□□□□ -0.05
CLK3-203ENST00000454830 L3MBTL3Q96JM7 780 aaPredicted RBP14.73□□□□□ -0.05
CLK3-203ENST00000454830 SASH3O75995 380 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 MCM3P25205 808 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 COPB2P35606 906 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 KCTD19Q17RG1 926 aaPredicted RBP14.72□□□□□ -0.05
CLK3-203ENST00000454830 CELF3Q5SZQ8 465 aaKnown RBP14.72□□□□□ -0.05
CLK3-203ENST00000454830 SLFN12LQ6IEE8 588 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 ARMCX2Q7L311 632 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 KREMEN1Q96MU8 473 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 AP1M1Q9BXS5 423 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 GPR88Q9GZN0 384 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 PDLIM7Q9NR12 457 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 PCDHGC5Q9Y5F6 944 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 SBF1O95248 1867 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 KIF4AO95239 1232 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 MEI1Q5TIA1 1274 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 HDAC7Q8WUI4 952 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 ARHGEF26Q96DR7 871 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 GPR20Q99678 358 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 SUCLA2Q9P2R7 463 aaPredicted RBP14.72□□□□□ -0.05
CLK3-203ENST00000454830 ZHX1Q9UKY1 873 aaPredicted RBP14.72□□□□□ -0.05
CLK3-203ENST00000454830 LOXHD1Q8IVV2 1947 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 ATG7O95352 703 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 EDNRBP24530 442 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 ADORA2AP29274 412 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 RTP1P59025 263 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 MESDQ14696 234 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 MAPK6Q16659 721 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 HSP90B2PQ58FF3 399 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 GPAT2Q6NUI2 795 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 SYCE1Q8N0S2 351 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 SLC30A5Q8TAD4 765 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 TMC2Q8TDI7 906 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 SCFD2Q8WU76 684 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 RFFLQ8WZ73 363 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 IMPG2Q9BZV3 1241 aa14.72□□□□□ -0.05
CLK3-203ENST00000454830 ASB14A6NK59 587 aa14.71□□□□□ -0.05
CLK3-203ENST00000454830 BUB1BO60566 1050 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms