RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 OCA2Q04671 838 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 GIPC2Q8TF65 315 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 CEP95Q96GE4 821 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 FBXO40Q9UH90 709 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 CHEK2O96017 543 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 ANTXR2P58335 489 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 STK4Q13043 487 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 TMEM270Q6UE05 265 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 TRAPPC11Q7Z392 1133 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 SYN2Q92777 582 aaPredicted RBP12.78□□□□□ -0.36
SEC16A-207ENST00000453963 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 TRIM51Q9BSJ1 452 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 ZHX2Q9Y6X8 837 aa12.78□□□□□ -0.36
SEC16A-207ENST00000453963 ATP8B3O60423 1300 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 FAM205CA6NFA0 338 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 ZBTB33Q86T24 672 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 NEDD1Q8NHV4 660 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 GFM2Q969S9 779 aaKnown RBP12.77□□□□□ -0.36
SEC16A-207ENST00000453963 ALKBH8Q96BT7 664 aaKnown RBP12.77□□□□□ -0.36
SEC16A-207ENST00000453963 RMDN3Q96TC7 470 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 KIFC3Q9BVG8 833 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 RPF1Q9H9Y2 349 aaKnown RBP12.77□□□□□ -0.36
SEC16A-207ENST00000453963 UVRAGQ9P2Y5 699 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 CDC42BPBQ9Y5S2 1711 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 UCHL3P15374 230 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 SCARA5Q6ZMJ2 495 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 SP8Q8IXZ3 490 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 CATSPER1Q8NEC5 780 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 GCOM2Q9BZD3 368 aaPredicted RBP12.77□□□□□ -0.36
SEC16A-207ENST00000453963 TBC1D22BQ9NU19 505 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.36
SEC16A-207ENST00000453963 ARHGEF40Q8TER5 1519 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 EDRF1Q3B7T1 1238 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 NBPF20Q3BBV1 942 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 KIAA1841Q6NSI8 718 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 SLC35G2Q8TBE7 412 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 SLC26A7Q8TE54 656 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 ANKS1AQ92625 1134 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 KRT82Q9NSB4 513 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 SLC26A4O43511 780 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 KITP10721 976 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 PRLRP16471 622 aa12.77□□□□□ -0.37
SEC16A-207ENST00000453963 RARS2Q5T160 578 aaKnown RBP12.77□□□□□ -0.37
SEC16A-207ENST00000453963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEC16A-207ENST00000453963 DACT3Q96B18 629 aaPredicted RBP12.77□□□□□ -0.37
SEC16A-207ENST00000453963 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 MRPS35P82673 323 aaKnown RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 HIC1Q14526 733 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 RYBPQ8N488 228 aaPredicted RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 OR2W6PQ8NHA6 318 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 RNF139Q8WU17 664 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 ZNF512BQ96KM6 892 aaPredicted RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 TRPV6Q9H1D0 765 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 VPS11Q9H270 941 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 LRFN2Q9ULH4 789 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 EMSYQ7Z589 1322 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 TRIM49P0CI25 452 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 TRIM49CP0CI26 452 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 CDO1Q16878 200 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 PPP6R3Q5H9R7 873 aaPredicted RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 RABGAP1LQ5R372 815 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 PASD1Q8IV76 773 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 ERP44Q9BS26 406 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 RANBP17Q9H2T7 1088 aaKnown RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 FAM8A1Q9UBU6 413 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 PPME1Q9Y570 386 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 IQSEC2Q5JU85 1478 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 FAM47DPA6NHR8 397 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 USP17L10C9JJH3 530 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 F5H6K3 240 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 ASAP2O43150 1006 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 EYA4O95677 639 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 P4HBP07237 508 aaKnown RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 OSTNP61366 133 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 GPSM2P81274 684 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 KLRC3Q07444 240 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 SPP2Q13103 211 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 HIF1AQ16665 826 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 DNAL1Q4LDG9 190 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 RASSF3Q86WH2 238 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 JAMLQ86YT9 394 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 PLA2G12BQ9BX93 195 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 SUN2Q9UH99 717 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 GGT7Q9UJ14 662 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 TRAF3IP3Q9Y228 551 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 SETBP1Q9Y6X0 1596 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 EIF4E1BA6NMX2 242 aaKnown RBP12.76□□□□□ -0.37
SEC16A-207ENST00000453963 TAP1Q03518 808 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 MORF4L2Q15014 288 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 EP400NLQ6ZTU2 488 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 FBXL13Q8NEE6 735 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 TAF6LQ9Y6J9 622 aa12.76□□□□□ -0.37
SEC16A-207ENST00000453963 GNA15P30679 374 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms