RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 TBC1D13Q9NVG8 400 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 SERTAD1Q9UHV2 236 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 FGF18O76093 207 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 ZNF202O95125 648 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 KRT18P05783 430 aaKnown RBP16.1■□□□□ 0.17
VPS16-205ENST00000453689 SLFN14P0C7P3 912 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 MCM4P33991 863 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 CAMK1Q14012 370 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 GIT2Q14161 759 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 THNSL1Q8IYQ7 743 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 HACE1Q8IYU2 909 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 TMEM161BQ8NDZ6 487 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 URGCPQ8TCY9 931 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 POF1BQ8WVV4 589 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 LRRC27Q9C0I9 530 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 NRDE2Q9H7Z3 1164 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 UBN1Q9NPG3 1134 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 KBTBD4Q9NVX7 518 aa16.1■□□□□ 0.17
VPS16-205ENST00000453689 LARSQ9P2J5 1176 aaKnown RBP16.1■□□□□ 0.17
VPS16-205ENST00000453689 INPPL1O15357 1258 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 ZC3H11AO75152 810 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS16-205ENST00000453689 NR1I2O75469 434 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 FAM13AO94988 1023 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 CSPG5O95196 566 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 AKAP5P24588 427 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 MLH1P40692 756 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 ZNF131P52739 623 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 SMTNP53814 917 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 NCKAP1LP55160 1127 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 BCAR1P56945 870 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 AMPD3Q01432 767 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 RNASELQ05823 741 aaKnown RBP16.09■□□□□ 0.17
VPS16-205ENST00000453689 SNW1Q13573 536 aaKnown RBP16.09■□□□□ 0.17
VPS16-205ENST00000453689 TIGD5Q53EQ6 642 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 ATF7IP2Q5U623 682 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 KRBA2Q6ZNG9 492 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 ZNF280BQ86YH2 543 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 SLC17A8Q8NDX2 589 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 CCDC34Q96HJ3 373 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 GAD1Q99259 594 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 ACO2Q99798 780 aaKnown RBP16.09■□□□□ 0.17
VPS16-205ENST00000453689 ADPGKQ9BRR6 497 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 PARVGQ9HBI0 331 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 KCNG1Q9UIX4 513 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 GIT1Q9Y2X7 761 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 BRWD1Q9NSI6 2320 aa16.09■□□□□ 0.17
VPS16-205ENST00000453689 ARL5CA6NH57 179 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 MYMKA6NI61 221 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 B4GALT3O60512 393 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 KINO60870 393 aaKnown RBP16.08■□□□□ 0.16
VPS16-205ENST00000453689 POMCP01189 267 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 MAPTP10636 758 aaKnown RBP16.08■□□□□ 0.16
VPS16-205ENST00000453689 PPM1AP35813 382 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 PLCB3Q01970 1234 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 UBE3AQ05086 875 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 SKIV2LQ15477 1246 aaKnown RBP16.08■□□□□ 0.16
VPS16-205ENST00000453689 DCAF4L1Q3SXM0 396 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 TCEAL5Q5H9L2 206 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 DYMQ7RTS9 669 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.08■□□□□ 0.16
VPS16-205ENST00000453689 SLC39A11Q8N1S5 342 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 MYCT1Q8N699 235 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 DDX12PQ92771 950 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 ZFP42Q96MM3 310 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 MRPL4Q9BYD3 311 aaKnown RBP16.08■□□□□ 0.16
VPS16-205ENST00000453689 GBP3Q9H0R5 595 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 NSUN3Q9H649 340 aaKnown RBP16.08■□□□□ 0.16
VPS16-205ENST00000453689 MIOSQ9NXC5 875 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 SPG21Q9NZD8 308 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 KANSL3Q9P2N6 904 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 TNFSF13BQ9Y275 285 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 ZMYM2Q9UBW7 1377 aa16.08■□□□□ 0.16
VPS16-205ENST00000453689 UNC80Q8N2C7 3258 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 NT5C1B-RDH14C9J2C7 533 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 TBCAO75347 108 aaKnown RBP16.07■□□□□ 0.16
VPS16-205ENST00000453689 DDHD2O94830 711 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 IRS1P35568 1242 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 ALDH7A1P49419 539 aaKnown RBP16.07■□□□□ 0.16
VPS16-205ENST00000453689 SCNN1GP51170 649 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 STRN3Q13033 797 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 KANK3Q6NY19 840 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 HAUS6Q7Z4H7 955 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 STAMQ92783 540 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 PAGE5Q96GU1 130 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 FIZ1Q96SL8 496 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 TARS2Q9BW92 718 aaKnown RBP16.07■□□□□ 0.16
VPS16-205ENST00000453689 TRIM9Q9C026 710 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 PTPRHQ9HD43 1115 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 SNTG2Q9NY99 539 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 KLK14Q9P0G3 267 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 THEGQ9P2T0 379 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 LZTS1Q9Y250 596 aa16.07■□□□□ 0.16
VPS16-205ENST00000453689 VWA8A3KMH1 1905 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 H0YCG3 227 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 K7ENM7 598 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 ABLIM1O14639 778 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms