RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 ALCAMQ13740 583 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 CCDC85BQ15834 202 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 KYAT1Q16773 422 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 AXDND1Q5T1B0 1012 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 NT5DC1Q5TFE4 455 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 RESP18Q5W5W9 173 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 HVCN1Q96D96 273 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 GAD1Q99259 594 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 ACO2Q99798 780 aaKnown RBP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 TARS2Q9BW92 718 aaKnown RBP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 GBP3Q9H0R5 595 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 NXF3Q9H4D5 531 aaKnown RBP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 NSUN3Q9H649 340 aaKnown RBP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 CWH43Q9H720 699 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 ALG13Q9NP73 1137 aaKnown RBP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 USP25Q9UHP3 1055 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 KCNH3Q9ULD8 1083 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-212ENST00000451542 EXOC7Q9UPT5 735 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 LZTS1Q9Y250 596 aa13.21□□□□□ -0.29
SMPD4-212ENST00000451542 TCHHQ07283 1943 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 FSD2A1L4K1 749 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 ARL5CA6NH57 179 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 HNRNPDLO14979 420 aaKnown RBP13.2□□□□□ -0.3
SMPD4-212ENST00000451542 INPPL1O15357 1258 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
SMPD4-212ENST00000451542 ITGB1P05556 798 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 LINC00271P0C7V0 271 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 MCF2P10911 925 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 CMA1P23946 247 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 MLH1P40692 756 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 BCAR1P56945 870 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 GRIK3Q13003 919 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-212ENST00000451542 MPZL3Q6UWV2 235 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 SPPL3Q8TCT6 385 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 POF1BQ8WVV4 589 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
SMPD4-212ENST00000451542 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 MRPL44Q9H9J2 332 aaKnown RBP13.2□□□□□ -0.3
SMPD4-212ENST00000451542 PANK4Q9NVE7 773 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 COG5Q9UP83 839 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 FAN1Q9Y2M0 1017 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 HES2Q9Y543 173 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
SMPD4-212ENST00000451542 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-212ENST00000451542 COL4A4P53420 1690 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-212ENST00000451542 KIAA1671Q9BY89 1806 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 MYMKA6NI61 221 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 MEIS3P2A8K0S8 358 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 GRM6O15303 877 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 POMCP01189 267 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 AKAP5P24588 427 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 EEF1DP3Q658K8 133 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 SLFN12LQ6IEE8 588 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 LRRC55Q6ZSA7 311 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 SLC39A11Q8N1S5 342 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 LRRC15Q8TF66 581 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 ACAP3Q96P50 834 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 COLEC11Q9BWP8 271 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 NRDE2Q9H7Z3 1164 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 NGRNQ9NPE2 291 aaKnown RBP13.19□□□□□ -0.3
SMPD4-212ENST00000451542 TLR9Q9NR96 1032 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 OLFML3Q9NRN5 406 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 KBTBD4Q9NVX7 518 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 ANKFY1Q9P2R3 1169 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 TBX20Q9UMR3 447 aa13.19□□□□□ -0.3
SMPD4-212ENST00000451542 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
SMPD4-212ENST00000451542 A0A087X0B3 334 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 RECQL4O94761 1208 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 THP07101 528 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 GALTP07902 379 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 GRM5P41594 1212 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 SCNN1GP51170 649 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 ASIC1P78348 528 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 GTF2BQ00403 316 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 NOLC1Q14978 699 aaKnown RBP eCLIP13.18□□□□□ -0.33e-9■□□□□ 10.1
SMPD4-212ENST00000451542 POSTNQ15063 836 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 E2F4Q16254 413 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 ZNF720Q7Z2F6 126 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 ZBTB33Q86T24 672 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 SFR1Q86XK3 245 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
SMPD4-212ENST00000451542 TRIM9Q9C026 710 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 CDT1Q9H211 546 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 THEGQ9P2T0 379 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 GDAQ9Y2T3 454 aa13.18□□□□□ -0.3
SMPD4-212ENST00000451542 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 GCNT3O95395 438 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 PIGRP01833 764 aa13.17□□□□□ -0.3
SMPD4-212ENST00000451542 MYL1P05976 194 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms