RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 KPNA7A9QM74 516 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 F8W8V4 182 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TAF4O00268 1085 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM24O15164 1050 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MTSS1O43312 755 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TSPAN1O60635 241 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CDH16O75309 829 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MOCS3O95396 460 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 BCL10O95999 233 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MT-ND3P03897 115 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 IFNA16P05015 189 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PYGLP06737 847 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CCDC130P13994 396 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 EEF1B2P24534 225 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ALDH5A1P51649 535 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 RASSF7Q02833 373 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PDE4DQ08499 809 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 WASHC5Q12768 1159 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PABPC4Q13310 644 aaKnown RBP eCLIP2.33□□□□□ -2.04
USP53-202ENST00000450251 TAB1Q15750 504 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 C5orf22Q49AR2 442 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SNX30Q5VWJ9 437 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 RSBN1Q5VWQ0 802 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 RNF207Q6ZRF8 634 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MFSD6Q6ZSS7 791 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 IKBIPQ70UQ0 350 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TAS2R42Q7RTR8 314 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 NEK8Q86SG6 692 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM50Q86XT4 487 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 RNF135Q8IUD6 432 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 NOSTRINQ8IVI9 506 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SNX31Q8N9S9 440 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ZNF555Q8NEP9 628 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 OR9Q1Q8NGQ5 310 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MTBPQ96DY7 904 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DEPDC7Q96QD5 511 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TESK2Q96S53 571 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ECSITQ9BQ95 431 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 LSM14BQ9BX40 385 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 SPATA16Q9BXB7 569 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ZHX3Q9H4I2 956 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 AS3MTQ9HBK9 375 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 VPS45Q9NRW7 570 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 RRN3Q9NYV6 651 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SERTAD1Q9UHV2 236 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MYRFQ9Y2G1 1151 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PLEKHG1Q9ULL1 1385 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ADGRB2O60241 1585 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM64A6NGJ6 449 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM64BA6NI03 449 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 B8ZZF3 427 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 UNC5CO95185 931 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DLGAP3O95886 979 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ASLP04424 464 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ATP1A1P05023 1023 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 HMOX1P09601 288 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CDH2P19022 906 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 IL10P22301 178 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ACAT1P24752 427 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 IFNA8P32881 189 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ABL2P42684 1182 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DPYSQ14117 519 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 EIF4A2Q14240 407 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 C16orf72Q14CZ0 275 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CCDC157Q569K6 752 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ZC3H12AQ5D1E8 599 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 TTC38Q5R3I4 469 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 KRT79Q5XKE5 535 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CCSAPQ6IQ19 270 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ERAP2Q6P179 960 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MIGA2Q7L4E1 593 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CCDC103Q8IW40 242 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TPH2Q8IWU9 490 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SCUBE1Q8IWY4 988 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 GIMAP8Q8ND71 665 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 RNASE11Q8TAA1 199 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ASAP3Q8TDY4 903 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ERP27Q96DN0 273 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TNIP3Q96KP6 325 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PHACTR3Q96KR7 559 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 BIRC8Q96P09 236 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 AGAP3Q96P47 875 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ACAP3Q96P50 834 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 GINS4Q9BRT9 223 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MAF1Q9H063 256 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ING2Q9H160 280 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRPV6Q9H1D0 765 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 STN1Q9H668 368 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 C20orf96Q9NUD7 363 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 RAB20Q9NX57 234 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SLC5A4Q9NY91 659 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DCDC2Q9UHG0 476 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TAGLN3Q9UI15 199 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 HERC5Q9UII4 1024 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 SERPINA10Q9UK55 444 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ZNF232Q9UNY5 417 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SLC12A4Q9UP95 1085 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 HPS5Q9UPZ3 1129 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 LZTS1Q9Y250 596 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms