RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 GDAQ9Y2T3 454 aa10.79□□□□□ -0.68
CCDC171-203ENST00000449575 HES2Q9Y543 173 aa10.79□□□□□ -0.68
CCDC171-203ENST00000449575 TDRD15B5MCY1 1934 aaKnown RBP10.78□□□□□ -0.68
CCDC171-203ENST00000449575 ACKR2O00590 384 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 UPP2O95045 317 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 GCNT3O95395 438 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 SMTNP53814 917 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 RASIP1Q5U651 963 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 SLC39A4Q6P5W5 647 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 MYOCDQ8IZQ8 938 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 HERVK_113Q902F9 699 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 LRRC27Q9C0I9 530 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 TBX20Q9UMR3 447 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 MAPK8IP1Q9UQF2 711 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 PHLPP2Q6ZVD8 1323 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 KIAA1671Q9BY89 1806 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 PFKMP08237 780 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 ATF7P17544 494 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-203ENST00000449575 GAP43P17677 238 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 TNNT3P45378 269 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-203ENST00000449575 GATMP50440 423 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 GTF2BQ00403 316 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 PRPF4BQ13523 1007 aaKnown RBP10.78□□□□□ -0.68
CCDC171-203ENST00000449575 FAM187BQ17R55 369 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 FAM26FQ5R3K3 315 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 PSRC1Q6PGN9 363 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-203ENST00000449575 PPP4R3CPQ6ZMV5 832 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 TXLNBQ8N3L3 684 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 LPPQ93052 612 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 RNPC3Q96LT9 517 aaKnown RBP10.78□□□□□ -0.68
CCDC171-203ENST00000449575 C2orf40Q9H1Z8 148 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 CXCL16Q9H2A7 254 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 TSPYL2Q9H2G4 693 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-203ENST00000449575 PDZD7Q9H5P4 517 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 TMEM134Q9H6X4 195 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 RNF19AQ9NV58 838 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 PRMT7Q9NVM4 692 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-203ENST00000449575 CNTNAP2Q9UHC6 1331 aa10.78□□□□□ -0.68
CCDC171-203ENST00000449575 A0A1B0GUA9 196 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 PVALEFA0A1B0GWK0 134 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 C9IYK1 514 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 ANKRD63C9JTQ0 380 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 BIN1O00499 593 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 ABLIM1O14639 778 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 BMP6P22004 513 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 CDC25BP30305 580 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 EFNA5P52803 228 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 TWF2Q6IBS0 349 aaKnown RBP10.77□□□□□ -0.68
CCDC171-203ENST00000449575 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 CEP120Q8N960 986 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 ZSWIM2Q8NEG5 633 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 SPATA20Q8TB22 786 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 SCFD1Q8WVM8 642 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 APBB2Q92870 758 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 ACO2Q99798 780 aaKnown RBP10.77□□□□□ -0.68
CCDC171-203ENST00000449575 RGS18Q9NS28 235 aa10.77□□□□□ -0.68
CCDC171-203ENST00000449575 FEZ2Q9UHY8 353 aaPredicted RBP10.77□□□□□ -0.68
CCDC171-203ENST00000449575 ZMYM2Q9UBW7 1377 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 ABHD14A-ACY1A0A1B0GW23 586 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 CAVIN2O95810 425 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 BMP8BP34820 402 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 SARSP49591 514 aaKnown RBP10.77□□□□□ -0.69
CCDC171-203ENST00000449575 AFF1P51825 1210 aaKnown RBP10.77□□□□□ -0.69
CCDC171-203ENST00000449575 RABGGTBP53611 331 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 PTPN14Q15678 1187 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 SEZ6Q53EL9 994 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 KANK3Q6NY19 840 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 EPM2AIP1Q7L775 607 aaPredicted RBP10.77□□□□□ -0.69
CCDC171-203ENST00000449575 NELFCDQ8IXH7 590 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 RNF39Q9H2S5 420 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 EXOC1Q9NV70 894 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 SEL1LQ9UBV2 794 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 PDCD11Q14690 1871 aaKnown RBP10.77□□□□□ -0.69
CCDC171-203ENST00000449575 NLRC5Q86WI3 1866 aa10.77□□□□□ -0.69
CCDC171-203ENST00000449575 PRUNE2Q8WUY3 3088 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 RHOBTB3O94955 611 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 SLU7O95391 586 aaKnown RBP10.76□□□□□ -0.69
CCDC171-203ENST00000449575 MYOGP15173 224 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 ZNF75DP51815 510 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 TPM4P67936 248 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 ATF7IP2Q5U623 682 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 FAM43BQ6ZT52 329 aaPredicted RBP10.76□□□□□ -0.69
CCDC171-203ENST00000449575 ZBTB33Q86T24 672 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 TMEM192Q8IY95 271 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 TDHQ8IZJ6 230 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 RNF169Q8NCN4 708 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
CCDC171-203ENST00000449575 CLSTN2Q9H4D0 955 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 NXF3Q9H4D5 531 aaKnown RBP10.76□□□□□ -0.69
CCDC171-203ENST00000449575 ST6GALNAC4Q9H4F1 302 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 PTPRHQ9HD43 1115 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 ANKFY1Q9P2R3 1169 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 NPTXRO95502 500 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 FGFR1P11362 822 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 HARSP12081 509 aaKnown RBP10.76□□□□□ -0.69
CCDC171-203ENST00000449575 ACTN1P12814 892 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 HNRNPH2P55795 449 aaKnown RBP10.76□□□□□ -0.69
CCDC171-203ENST00000449575 ZBTB41Q5SVQ8 909 aa10.76□□□□□ -0.69
CCDC171-203ENST00000449575 PRPF38BQ5VTL8 546 aaKnown RBP10.76□□□□□ -0.69
CCDC171-203ENST00000449575 NOTUMQ6P988 496 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms