RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DEUP1Q05D60 604 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 BTKQ06187 659 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 KAT5Q92993 513 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 STK33Q9BYT3 514 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 PHTF1Q9UMS5 762 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 AGAP1Q9UPQ3 857 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 TISP43B9A030 160 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 CDH16O75309 829 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 NCF2P19878 526 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-204ENST00000449510 GRIK5Q16478 980 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 GPATCH4Q5T3I0 446 aaKnown RBP13.21□□□□□ -0.29
UBE3B-204ENST00000449510 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 CFAP36Q96G28 342 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 THTPAQ9BU02 230 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 CARD9Q9H257 536 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 APEX2Q9UBZ4 518 aa13.21□□□□□ -0.29
UBE3B-204ENST00000449510 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 E2F8A0AVK6 867 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 FAM47DPA6NHR8 397 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 RIPK2O43353 540 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 SGPL1O95470 568 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 KRT10P13645 584 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 PGM1P36871 562 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 RPS6KC1Q96S38 1066 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 PCSK1NQ9UHG2 260 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.3
UBE3B-204ENST00000449510 NOL4O94818 638 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 BMP3P12645 472 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 ALAS1P13196 640 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 ARSEP51690 589 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 GSCP56915 257 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-204ENST00000449510 THOC5Q13769 683 aaKnown RBP13.2□□□□□ -0.3
UBE3B-204ENST00000449510 TRAPPC3LQ5T215 181 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 LVRNQ6Q4G3 990 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-204ENST00000449510 SLC26A7Q8TE54 656 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBE3B-204ENST00000449510 SNF8Q96H20 258 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 PPP1R36Q96LQ0 422 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 MTFR1LQ9H019 292 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 JMJD4Q9H9V9 463 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 TCRBV7S2A1N4TA0A589 114 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 VAMP7P51809 220 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 TAF1BQ53T94 588 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-204ENST00000449510 RGS9BPQ6ZS82 235 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 EXOC3L1Q86VI1 746 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 C8orf37Q96NL8 207 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 PURBQ96QR8 312 aaKnown RBP13.2□□□□□ -0.3
UBE3B-204ENST00000449510 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 AIPL1Q9NZN9 384 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 MYH8P13535 1937 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 TECPR2O15040 1411 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 PDXKO00764 312 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 MAP3K6O95382 1288 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 RALAP11233 206 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 PTENP60484 403 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 MAP7Q14244 749 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 PALB2Q86YC2 1186 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 TTC8Q8TAM2 541 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 SNRNP27Q8WVK2 155 aaKnown RBP13.2□□□□□ -0.3
UBE3B-204ENST00000449510 ADAM22Q9P0K1 906 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 ARMCX1Q9P291 453 aa13.2□□□□□ -0.3
UBE3B-204ENST00000449510 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 H7C0C1 242 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 KRT34O76011 436 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 TMEM253P0C7T8 217 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 RARAP10276 462 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 ATP5OP48047 213 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 SCARA5Q6ZMJ2 495 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 LRRC43Q8N309 656 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 PPM1NQ8N819 430 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 SMC1BQ8NDV3 1235 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 RBM46Q8TBY0 533 aaKnown RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 MAIP1Q8WWC4 291 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 ZNF668Q96K58 619 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 MTMR4Q9NYA4 1195 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 H3BRJ5 948 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 DNAJC6O75061 913 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 RARGP13631 454 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 KRT4P19013 534 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 ALDH18A1P54886 795 aaKnown RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 OSTNP61366 133 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 AUHQ13825 339 aaKnown RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 CNGA2Q16280 664 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 NXNQ6DKJ4 435 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 CD302Q8IX05 232 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 SYN2Q92777 582 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 KIFC3Q9BVG8 833 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 C10orf88Q9H8K7 445 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 ANLNQ9NQW6 1124 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms