RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CD52P31358 61 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 CASP4P49662 377 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 GPNMBQ14956 572 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 CDR2LQ86X02 465 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-203ENST00000449049 GPD1LQ8N335 351 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 ZSWIM2Q8NEG5 633 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 CNOT6LQ96LI5 555 aaKnown RBP15.34■□□□□ 0.05
SHMT2-203ENST00000449049 TCHPQ9BT92 498 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 WNT8AQ9H1J5 351 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 CHST12Q9NRB3 414 aa15.34■□□□□ 0.05
SHMT2-203ENST00000449049 KCNJ18B7U540 433 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 KIAA0355O15063 1070 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 EXTL3O43909 919 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 NBNO60934 754 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 LDHAP00338 332 aaKnown RBP15.33■□□□□ 0.04
SHMT2-203ENST00000449049 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 EEF1GP26641 437 aaKnown RBP15.33■□□□□ 0.04
SHMT2-203ENST00000449049 PSMC2P35998 433 aaKnown RBP15.33■□□□□ 0.04
SHMT2-203ENST00000449049 MATR3P43243 847 aaKnown RBP eCLIP15.33■□□□□ 0.04
SHMT2-203ENST00000449049 SPAG1Q07617 926 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 NFX1Q12986 1120 aaKnown RBP15.33■□□□□ 0.04
SHMT2-203ENST00000449049 KCNJ12Q14500 433 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 HSP90AA4PQ58FG1 418 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 TCP11X2Q5H9J9 407 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 CEP135Q66GS9 1140 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 ZBTB33Q86T24 672 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 SAAL1Q96ER3 474 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 ADPGKQ9BRR6 497 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 PPP1R12CQ9BZL4 782 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 KIAA1586Q9HCI6 787 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 FRMD4BQ9Y2L6 1034 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 DNAH12Q6ZR08 3092 aa15.33■□□□□ 0.04
SHMT2-203ENST00000449049 OGTO15294 1046 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 EPB41P11171 864 aaKnown RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 HSP90AA2PQ14568 343 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 DCAF4L1Q3SXM0 396 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 FRMD5Q7Z6J6 570 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 BORCS6Q96GS4 357 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 TMX1Q9H3N1 280 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 GRPEL1Q9HAV7 217 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 MAGEC2Q9UBF1 373 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 CYP2C18P33260 490 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 DSC3Q14574 896 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 SNRNP35Q16560 246 aaKnown RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 UBXN11Q5T124 520 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 CRELD2Q6UXH1 353 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 FAM43BQ6ZT52 329 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 APBB1IPQ7Z5R6 666 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 CBWD2Q8IUF1 395 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 FAM186BQ8IYM0 893 aa15.32■□□□□ 0.04
SHMT2-203ENST00000449049 LIMA1Q9UHB6 759 aaKnown RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 KIAA0100Q14667 2235 aaKnown RBP15.32■□□□□ 0.04
SHMT2-203ENST00000449049 GOLGA8IPA6NC78 632 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 TRIM43BA6NCK2 446 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 GOLGA8JA6NMD2 632 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 RBAK-RBAKDNI3L0D1 243 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 CXCL10P02778 98 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 ADRB2P07550 413 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 HARSP12081 509 aaKnown RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 MCCD1P59942 119 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 CCDC40Q4G0X9 1142 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 PLEKHG4Q58EX7 1191 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 ZBTB41Q5SVQ8 909 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 APTXQ7Z2E3 356 aaKnown RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 TRIM43Q96BQ3 446 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 FAM213AQ9BRX8 229 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 EIF2AQ9BY44 585 aaKnown RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 IFIH1Q9BYX4 1025 aaKnown RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 CPSF3Q9UKF6 684 aaKnown RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 LRRC10BA6NIK2 292 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 NPTXRO95502 500 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 TIMP1P01033 207 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 CDK11BP21127 795 aaKnown RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 CCL23P55773 120 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 KYAT1Q16773 422 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 TRIM59Q8IWR1 403 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 SCLYQ96I15 445 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 MFSD14AQ96MC6 490 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 TRAIPQ9BWF2 469 aa15.31■□□□□ 0.04
SHMT2-203ENST00000449049 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-203ENST00000449049 RFC2P35250 354 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 GRM5P41594 1212 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 ACOT2P49753 483 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 POU5F1Q01860 360 aaKnown RBP15.3■□□□□ 0.04
SHMT2-203ENST00000449049 ENPEPQ07075 957 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 KRT31Q15323 416 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 SARM1Q6SZW1 724 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 INTS8Q75QN2 995 aaKnown RBP15.3■□□□□ 0.04
SHMT2-203ENST00000449049 CEP120Q8N960 986 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 RDH13Q8NBN7 331 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 ANKRD20A12PQ8NF67 263 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 PRDM5Q9NQX1 630 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-203ENST00000449049 SCN5AQ14524 2016 aa15.3■□□□□ 0.04
SHMT2-203ENST00000449049 ZNF233A6NK53 670 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 MGEA5O60502 916 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-203ENST00000449049 TNFSF9P41273 254 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 CYP24A1Q07973 514 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms