RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 PARD3BQ8TEW8 1205 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 PSPC1Q8WXF1 523 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 EMID1Q96A84 441 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 CALR3Q96L12 384 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 MFSD14AQ96MC6 490 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 TMEM8AQ9HCN3 771 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 CDC23Q9UJX2 597 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 DNAJC12Q9UKB3 198 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 IGKV6-21A0A0C4DH24 114 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 A0A0U1RQJ8 604 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 EFCAB8A8MWE9 144 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 ZNF263O14978 683 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 EXTL3O43909 919 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 SOX5P35711 763 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 INHBEP58166 350 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 ARID5AQ03989 594 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 GFPT1Q06210 699 aaPredicted RBP11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 CYP24A1Q07973 514 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 BMS1Q14692 1282 aaKnown RBP11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 PLCB4Q15147 1175 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 EPC2Q52LR7 807 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 ZNF484Q5JVG2 852 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 TAPT1Q6NXT6 567 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 SLC39A4Q6P5W5 647 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 ZPBP2Q6X784 338 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 CBWD2Q8IUF1 395 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 PPTC7Q8NI37 304 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 ATRIPQ8WXE1 791 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 SAAL1Q96ER3 474 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 ABHD16BQ9H3Z7 469 aa11.46□□□□□ -0.58
VIPAS39-203ENST00000448935 COL1A2P08123 1366 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 GOLGA8IPA6NC78 632 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 GOLGA8JA6NMD2 632 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 F8VZ95 297 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 SPTLC1O15269 473 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 FANCGO15287 622 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 ADRB2P07550 413 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 GCLMP48507 274 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 ZNF157P51786 506 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 DLG4P78352 724 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 APBA1Q02410 837 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 ARHGAP1Q07960 439 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 PPP3CAQ08209 521 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 CAPSQ13938 189 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 DRAP1Q14919 205 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 WHAMMP3Q1A5X7 153 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 CST9Q5W186 159 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 TAS1R3Q7RTX0 852 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 ZNF454Q8N9F8 522 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 LMO3Q8TAP4 145 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 UBXN4Q92575 508 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 MAML3Q96JK9 1138 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 LACRTQ9GZZ8 138 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 TMEM117Q9H0C3 514 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 PDGFCQ9NRA1 345 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 AGO2Q9UKV8 859 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 COQ4Q9Y3A0 265 aa11.45□□□□□ -0.58
VIPAS39-203ENST00000448935 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 MAGEB2O15479 319 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 ZC3H11AO75152 810 aaKnown RBP eCLIP11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 CD46P15529 392 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 MARK3P27448 753 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 ABL2P42684 1182 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 PTK2Q05397 1052 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 PSMD6Q15008 389 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 NAB2Q15742 525 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 IFI16Q16666 785 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 C1orf220Q5T0J3 134 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 CDCA2Q69YH5 1023 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 IQSEC1Q6DN90 963 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 FBXL13Q8NEE6 735 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 PRPF31Q8WWY3 499 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 COPS5Q92905 334 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 NOX5Q96PH1 765 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 FNBP1Q96RU3 617 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 MAP7D2Q96T17 732 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 PTPN18Q99952 460 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 FAM213AQ9BRX8 229 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 TINF2Q9BSI4 451 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 CARD6Q9BX69 1037 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 MRPL4Q9BYD3 311 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 NMRK2Q9NPI5 230 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 TRIM10Q9UDY6 481 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 ADAMTS1Q9UHI8 967 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 JRKLQ9Y4A0 524 aa11.44□□□□□ -0.58
VIPAS39-203ENST00000448935 A0A087X0T9 212 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 MACROD2A1Z1Q3 448 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 RCCD1A6NED2 376 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 LRRIQ3A6PVS8 624 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 PPFIA4O75335 1185 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 ABL1P00519 1130 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 LGALS2P05162 132 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 FAM228BP0C875 321 aa11.43□□□□□ -0.58
VIPAS39-203ENST00000448935 C7P10643 843 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms