RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 DDX53Q86TM3 631 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 GPBP1Q86WP2 473 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 COLGALT2Q8IYK4 626 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 EFHBQ8N7U6 833 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 RAD54LQ92698 747 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 TMEM175Q9BSA9 504 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 NGRNQ9NPE2 291 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 ENTPD7Q9NQZ7 604 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 ARHGAP28Q9P2N2 729 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 TFIP11Q9UBB9 837 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 PARP2Q9UGN5 583 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 FAN1Q9Y2M0 1017 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 CARNS1A5YM72 827 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 NRP1O14786 923 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 TBX10O75333 385 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 CXCL14O95715 111 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 DDIT3P35638 169 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 CACNB1Q02641 598 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 DSC1Q08554 894 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 ATF7IP2Q5U623 682 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 PTCRAQ6ISU1 281 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 VPS52Q8N1B4 723 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 MRPL43Q8N983 215 aaKnown RBP14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 RASSF8Q8NHQ8 419 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 SPIRE2Q8WWL2 714 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 UHRF1Q96T88 793 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 ACO2Q99798 780 aaKnown RBP14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 ADPGKQ9BRR6 497 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 VN1R3Q9BXE9 311 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 SNTG2Q9NY99 539 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 MORC2Q9Y6X9 1032 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-203ENST00000448428 PHLPP2Q6ZVD8 1323 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 GRXCR2A6NFK2 248 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 GLP2RO95838 553 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 ZSCAN22P10073 491 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 PDIA4P13667 645 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 NASPP49321 788 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 SMTNP53814 917 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 RBM10P98175 930 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 GIT2Q14161 759 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 SMC1AQ14683 1233 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 DUSP6Q16828 381 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 LINC00301Q8NCQ3 95 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 TMEM161BQ8NDZ6 487 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 VN1R2Q8NFZ6 395 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 AUTS2Q8WXX7 1259 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 LARP4BQ92615 738 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 REEP2Q9BRK0 252 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 TARS2Q9BW92 718 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 MRPL4Q9BYD3 311 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 CXCL16Q9H2A7 254 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 PTPRHQ9HD43 1115 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 CLEC1BQ9P126 229 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 KCNG1Q9UIX4 513 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 ODF2LQ9ULJ1 636 aa14.01□□□□□ -0.17
PRPF40A-203ENST00000448428 XIRP2A4UGR9 3374 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 ZMYM2Q9UBW7 1377 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 C2orf71A6NGG8 1288 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 RECQL4O94761 1208 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 MAPTP10636 758 aaKnown RBP14□□□□□ -0.17
PRPF40A-203ENST00000448428 IL9P15248 144 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 OR1G1P47890 313 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 NDUFV1P49821 464 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 PKP1Q13835 747 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 KCNC3Q14003 757 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 STK38Q15208 465 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 CLUL1Q15846 466 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 PUS10Q3MIT2 529 aaKnown RBP14□□□□□ -0.17
PRPF40A-203ENST00000448428 DCAF4L1Q3SXM0 396 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 KRI1Q8N9T8 703 aaKnown RBP14□□□□□ -0.17
PRPF40A-203ENST00000448428 MSLNLQ96KJ4 702 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 CDCA3Q99618 268 aaPredicted RBP14□□□□□ -0.17
PRPF40A-203ENST00000448428 PANK2Q9BZ23 570 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 ZBP1Q9H171 429 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 MARCH5Q9NX47 278 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 LARSQ9P2J5 1176 aaKnown RBP14□□□□□ -0.17
PRPF40A-203ENST00000448428 CCDC39Q9UFE4 941 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 GDAQ9Y2T3 454 aa14□□□□□ -0.17
PRPF40A-203ENST00000448428 F8W810 466 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 TNFRSF10AO00220 468 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 ABLIM1O14639 778 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 PTGESO14684 152 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 SPTLC2O15270 562 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 F13A1P00488 732 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 KRT18P05783 430 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 CTSAP10619 480 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 NCKAP1LP55160 1127 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 GRIK3Q13003 919 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 STRN3Q13033 797 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 BMS1Q14692 1282 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 FOXD4L6Q3SYB3 417 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 RRAGBQ5VZM2 374 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 FOXD4L3Q6VB84 417 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 TMEM184AQ6ZMB5 413 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 HAUS6Q7Z4H7 955 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 MYCT1Q8N699 235 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 RABGGTAQ92696 567 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms