RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MAPTP10636 758 aaKnown RBP15.97■□□□□ 0.15
SF1-211ENST00000448404 MUTP22033 750 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 PPATQ06203 517 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 KIF22Q14807 665 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 DCAF15Q66K64 600 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 CATSPERGQ6ZRH7 1159 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 RNPC3Q96LT9 517 aaKnown RBP15.97■□□□□ 0.15
SF1-211ENST00000448404 MTFR1LQ9H019 292 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 CYP26B1Q9NR63 512 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 UBE4BO95155 1302 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 TMEM253P0C7T8 217 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 SMTNP53814 917 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 MAP4K3Q8IVH8 894 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 HELQQ8TDG4 1101 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 FAM118BQ9BPY3 351 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 VIPAS39Q9H9C1 493 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 MED4Q9NPJ6 270 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 NOCTQ9UK39 431 aaKnown RBP15.96■□□□□ 0.15
SF1-211ENST00000448404 LYPLA2O95372 231 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 RPS12P25398 132 aaKnown RBP15.96■□□□□ 0.15
SF1-211ENST00000448404 FMO1Q01740 532 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 LRRC31Q6UY01 552 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 CPA5Q8WXQ8 436 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 PPP1R16BQ96T49 567 aa15.96■□□□□ 0.15
SF1-211ENST00000448404 TARS2Q9BW92 718 aaKnown RBP15.96■□□□□ 0.15
SF1-211ENST00000448404 UMODL1Q5DID0 1318 aa15.96■□□□□ 0.14
SF1-211ENST00000448404 COMTP21964 271 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 TNNC1P63316 161 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 GHRHRQ02643 423 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 C10orf76Q5T2E6 689 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 GADL1Q6ZQY3 521 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 NCAPG2Q86XI2 1143 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 UHMK1Q8TAS1 419 aaKnown RBP15.95■□□□□ 0.14
SF1-211ENST00000448404 C18orf8Q96DM3 657 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 VPS33BQ9H267 617 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 ACBD3Q9H3P7 528 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 ACAD9Q9H845 621 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 GPRC5DQ9NZD1 345 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 BTNL10A8MVZ5 291 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 O00370 1275 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 CSDE1O75534 798 aaKnown RBP15.95■□□□□ 0.14
SF1-211ENST00000448404 USP2O75604 605 aaPredicted RBP15.95■□□□□ 0.14
SF1-211ENST00000448404 KCNJ1P48048 391 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 POLGP54098 1239 aaPredicted RBP15.95■□□□□ 0.14
SF1-211ENST00000448404 LY6KQ17RY6 165 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 WDR78Q5VTH9 848 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 ABHD15Q6UXT9 468 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 MAATS1Q7Z4T9 603 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 OTUD5Q96G74 571 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 SUCLA2Q9P2R7 463 aaPredicted RBP15.95■□□□□ 0.14
SF1-211ENST00000448404 ZNF112Q9UJU3 913 aa15.95■□□□□ 0.14
SF1-211ENST00000448404 CYP11B1P15538 503 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 TNNI1P19237 187 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 SFNP31947 248 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 TRAPPC12Q8WVT3 735 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 PTPN22Q9Y2R2 807 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 AFG3L2Q9Y4W6 797 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 ANKRD62A6NC57 917 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 CYP24A1Q07973 514 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 CETN1Q12798 172 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 PDCLQ13371 301 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 EMC2Q15006 297 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 UAP1Q16222 522 aaPredicted RBP15.94■□□□□ 0.14
SF1-211ENST00000448404 FAM182AQ5T1J6 154 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 CFAP58Q5T655 872 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 KRT39Q6A163 491 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 KCTD17Q8N5Z5 321 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 ACTRT1Q8TDG2 376 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 FAM212AQ96EL1 285 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 ELP3Q9H9T3 547 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 AS3MTQ9HBK9 375 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 ANKEF1Q9NU02 776 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 RAB20Q9NX57 234 aa15.94■□□□□ 0.14
SF1-211ENST00000448404 IRF6O14896 467 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 HSF2BPO75031 334 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 PSAPP07602 524 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 ACTN2P35609 894 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 PAK2Q13177 524 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 BIRC3Q13489 604 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 EMBQ6PCB8 327 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 ZBTB33Q86T24 672 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 FAM71AQ8IYT1 594 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 LRRC71Q8N4P6 559 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 GOLGA6L1Q8N7Z2 621 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 PPP1R13LQ8WUF5 828 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 ZNF653Q96CK0 615 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 GPRASP2Q96D09 838 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 RUFY1Q96T51 708 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 NUP85Q9BW27 656 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 PLAAQ9Y263 795 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 SNCAIPQ9Y6H5 919 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 RLFQ13129 1914 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 PYGMP11217 842 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 HPDP32754 393 aaPredicted RBP15.93■□□□□ 0.14
SF1-211ENST00000448404 LIG4P49917 911 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 SF3A3Q12874 501 aaKnown RBP eCLIP15.93■□□□□ 0.144e-7■■■□□ 14.8
SF1-211ENST00000448404 IFI16Q16666 785 aaKnown RBP15.93■□□□□ 0.14
SF1-211ENST00000448404 FAM76AQ8TAV0 307 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 ATP6V0A1Q93050 837 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms