RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 PTPN5P54829 565 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 ZNF174Q15697 407 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 SLC27A1Q6PCB7 646 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 UBALD2Q8IYN6 164 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 HACE1Q8IYU2 909 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 RNF168Q8IYW5 571 aaPredicted RBP31.35■■■□□ 2.61
CBX4-202ENST00000448310 GSTCDQ8NEC7 633 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 C8orf76Q96K31 380 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 MAN1C1Q9NR34 630 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 USTQ9Y2C2 406 aa31.35■■■□□ 2.61
CBX4-202ENST00000448310 EFEMP2O95967 443 aa31.34■■■□□ 2.61
CBX4-202ENST00000448310 GLUD2P49448 558 aa31.34■■■□□ 2.61
CBX4-202ENST00000448310 POTEGQ6S5H5 508 aa31.34■■■□□ 2.61
CBX4-202ENST00000448310 RABGGTAQ92696 567 aa31.34■■■□□ 2.61
CBX4-202ENST00000448310 B3GALT6Q96L58 329 aa31.34■■■□□ 2.61
CBX4-202ENST00000448310 PARP2Q9UGN5 583 aa31.34■■■□□ 2.61
CBX4-202ENST00000448310 LIMCH1Q9UPQ0 1083 aa31.34■■■□□ 2.61
CBX4-202ENST00000448310 A0A1B0GUA9 196 aa31.33■■■□□ 2.61
CBX4-202ENST00000448310 KIAA0319Q5VV43 1072 aa31.33■■■□□ 2.61
CBX4-202ENST00000448310 ERICH6BQ5W0A0 696 aa31.33■■■□□ 2.61
CBX4-202ENST00000448310 CCDC149Q6ZUS6 474 aa31.33■■■□□ 2.61
CBX4-202ENST00000448310 PLCD3Q8N3E9 789 aa31.33■■■□□ 2.61
CBX4-202ENST00000448310 PRRX2Q99811 253 aa31.33■■■□□ 2.61
CBX4-202ENST00000448310 CACNG4Q9UBN1 327 aa31.33■■■□□ 2.61
CBX4-202ENST00000448310 MTCL1Q9Y4B5 1905 aaKnown RBP31.32■■■□□ 2.6
CBX4-202ENST00000448310 EIF5BO60841 1220 aaKnown RBP31.32■■■□□ 2.6
CBX4-202ENST00000448310 NR1I2O75469 434 aa31.32■■■□□ 2.6
CBX4-202ENST00000448310 ADH1AP07327 375 aa31.32■■■□□ 2.6
CBX4-202ENST00000448310 OR52Z1P0C646 297 aa31.32■■■□□ 2.6
CBX4-202ENST00000448310 MCPH1Q8NEM0 835 aa31.32■■■□□ 2.6
CBX4-202ENST00000448310 BSNDQ8WZ55 320 aa31.32■■■□□ 2.6
CBX4-202ENST00000448310 NACC1Q96RE7 527 aa31.32■■■□□ 2.6
CBX4-202ENST00000448310 POLR3CQ9BUI4 534 aaPredicted RBP31.32■■■□□ 2.6
CBX4-202ENST00000448310 COLEC11Q9BWP8 271 aa31.32■■■□□ 2.6
CBX4-202ENST00000448310 SSX2IPQ9Y2D8 614 aa31.32■■■□□ 2.6
CBX4-202ENST00000448310 TTLL13PA6NNM8 815 aa31.31■■■□□ 2.6
CBX4-202ENST00000448310 DSG1Q02413 1049 aa31.31■■■□□ 2.6
CBX4-202ENST00000448310 CDCA2Q69YH5 1023 aaPredicted RBP31.31■■■□□ 2.6
CBX4-202ENST00000448310 GPR62Q9BZJ7 368 aa31.31■■■□□ 2.6
CBX4-202ENST00000448310 PRMT7Q9NVM4 692 aaPredicted RBP31.31■■■□□ 2.6
CBX4-202ENST00000448310 CACNA1HO95180 2353 aa31.31■■■□□ 2.6
CBX4-202ENST00000448310 GRIK3Q13003 919 aa31.3■■■□□ 2.6
CBX4-202ENST00000448310 FUT10Q6P4F1 479 aa31.3■■■□□ 2.6
CBX4-202ENST00000448310 PPP4R3CPQ6ZMV5 832 aa31.3■■■□□ 2.6
CBX4-202ENST00000448310 ZBTB8OSQ8IWT0 167 aa31.3■■■□□ 2.6
CBX4-202ENST00000448310 ACSF2Q96CM8 615 aaPredicted RBP31.3■■■□□ 2.6
CBX4-202ENST00000448310 RXFP1Q9HBX9 757 aa31.3■■■□□ 2.6
CBX4-202ENST00000448310 USP20Q9Y2K6 914 aa31.3■■■□□ 2.6
CBX4-202ENST00000448310 GLUD1P00367 558 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 SPATA31D3P0C874 917 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 PADI6Q6TGC4 694 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 C15orf39Q6ZRI6 1047 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 SPATA31D4Q6ZUB0 917 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 OTOP3Q7RTS5 596 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 ERMNQ8TAM6 284 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 PRIMPOLQ96LW4 560 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 FZD8Q9H461 694 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 CHST7Q9NS84 486 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 FAM86C1Q9NVL1 165 aa31.29■■■□□ 2.6
CBX4-202ENST00000448310 ARHGEF35A5YM69 484 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 LIG1P18858 919 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 RPA1P27694 616 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 TTC38Q5R3I4 469 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 PALB2Q86YC2 1186 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 GLYCTKQ8IVS8 523 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 PAAF1Q9BRP4 392 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 LLPHQ9BRT6 129 aaKnown RBP31.28■■■□□ 2.6
CBX4-202ENST00000448310 FOXP1Q9H334 677 aaPredicted RBP31.28■■■□□ 2.6
CBX4-202ENST00000448310 PDZD7Q9H5P4 517 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 POLD4Q9HCU8 107 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 ADAM28Q9UKQ2 775 aa31.28■■■□□ 2.6
CBX4-202ENST00000448310 CCDC195A0A1B0GUA6 201 aa31.27■■■□□ 2.6
CBX4-202ENST00000448310 RFPL2O75678 378 aa31.27■■■□□ 2.6
CBX4-202ENST00000448310 NBR1Q14596 966 aa31.27■■■□□ 2.6
CBX4-202ENST00000448310 TMEM132AQ24JP5 1023 aa31.27■■■□□ 2.6
CBX4-202ENST00000448310 CMASQ8NFW8 434 aaPredicted RBP31.27■■■□□ 2.6
CBX4-202ENST00000448310 EDN1P05305 212 aa31.26■■■□□ 2.59
CBX4-202ENST00000448310 CYP11B2P19099 503 aa31.26■■■□□ 2.59
CBX4-202ENST00000448310 ECM1Q16610 540 aa31.26■■■□□ 2.59
CBX4-202ENST00000448310 FAM187BQ17R55 369 aa31.26■■■□□ 2.59
CBX4-202ENST00000448310 FBXO18Q8NFZ0 1043 aa31.26■■■□□ 2.59
CBX4-202ENST00000448310 RIN2Q8WYP3 895 aaPredicted RBP31.26■■■□□ 2.59
CBX4-202ENST00000448310 CXCL16Q9H2A7 254 aa31.26■■■□□ 2.59
CBX4-202ENST00000448310 SNTG2Q9NY99 539 aa31.26■■■□□ 2.59
CBX4-202ENST00000448310 ZMYM2Q9UBW7 1377 aa31.26■■■□□ 2.59
CBX4-202ENST00000448310 DOCK8Q8NF50 2099 aa31.25■■■□□ 2.59
CBX4-202ENST00000448310 PRKCBP05771 671 aa31.25■■■□□ 2.59
CBX4-202ENST00000448310 RPL17P18621 184 aaKnown RBP31.25■■■□□ 2.59
CBX4-202ENST00000448310 ORC2Q13416 577 aaPredicted RBP31.25■■■□□ 2.59
CBX4-202ENST00000448310 PRPF4BQ13523 1007 aaKnown RBP31.25■■■□□ 2.59
CBX4-202ENST00000448310 GNL2Q13823 731 aaKnown RBP31.25■■■□□ 2.59
CBX4-202ENST00000448310 USP41Q3LFD5 358 aa31.25■■■□□ 2.59
CBX4-202ENST00000448310 HASPINQ8TF76 798 aa31.25■■■□□ 2.59
CBX4-202ENST00000448310 C2orf40Q9H1Z8 148 aa31.25■■■□□ 2.59
CBX4-202ENST00000448310 TRIP11Q15643 1979 aa31.25■■■□□ 2.59
CBX4-202ENST00000448310 CASTOR2A6NHX0 329 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 N4BP3O15049 544 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 N4BP1O75113 896 aaKnown RBP31.24■■■□□ 2.59
CBX4-202ENST00000448310 TADA2AO75478 443 aa31.24■■■□□ 2.59
CBX4-202ENST00000448310 HSP90AA2PQ14568 343 aaPredicted RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms