RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 WFDC12Q8WWY7 111 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 CLEC4DQ8WXI8 215 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 KLHL5Q96PQ7 755 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 MYADMQ96S97 322 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 MPHOSPH6Q99547 160 aaKnown RBP3.85□□□□□ -1.79
PMS1-215ENST00000447232 ANTXR1Q9H6X2 564 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 AGO3Q9H9G7 860 aaKnown RBP3.85□□□□□ -1.79
PMS1-215ENST00000447232 LTB4R2Q9NPC1 389 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 CLIP2Q9UDT6 1046 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 PUF60Q9UHX1 559 aaKnown RBP3.85□□□□□ -1.79
PMS1-215ENST00000447232 CCPG1Q9ULG6 757 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 DOPEY1Q5JWR5 2465 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 LAMA4Q16363 1823 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 ZBED9Q6R2W3 1325 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 ACACAQ13085 2346 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 PTPDC1A2A3K4 754 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 FAM170BA6NMN3 283 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 J3QKU1 62 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 SCG2P13521 617 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 EPCAMP16422 314 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 SNAP25P60880 206 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 PRKCQQ04759 706 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 HTR4Q13639 388 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 SIM2Q14190 667 aaPredicted RBP3.85□□□□□ -1.79
PMS1-215ENST00000447232 SMC1AQ14683 1233 aaKnown RBP3.85□□□□□ -1.79
PMS1-215ENST00000447232 ARTNQ5T4W7 220 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 SLFN13Q68D06 897 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 RSPO2Q6UXX9 243 aaPredicted RBP3.85□□□□□ -1.79
PMS1-215ENST00000447232 C15orf39Q6ZRI6 1047 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 TSHZ1Q6ZSZ6 1077 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 TMC7Q7Z402 723 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.85□□□□□ -1.79
PMS1-215ENST00000447232 ZNF605Q86T29 641 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 STK32AQ8WU08 396 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 FTHL17Q9BXU8 183 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 PCGF6Q9BYE7 350 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 SFXN1Q9H9B4 322 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 ATP8A2Q9NTI2 1148 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 TYW1Q9NV66 732 aaKnown RBP3.85□□□□□ -1.79
PMS1-215ENST00000447232 MYH15Q9Y2K3 1946 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 APC2O95996 2303 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 TCRBV5S4A2TA0A5A2 114 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 H3BRB1 525 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 PRKAB2O43741 272 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 NTRK1P04629 796 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 CEACAM1P13688 526 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 LAG3P18627 525 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 EIF2AK2P19525 551 aaKnown RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 CALML3P27482 149 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 NOS3P29474 1203 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 RPS6P62753 249 aaKnown RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 MTAPQ13126 283 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 SNW1Q13573 536 aaKnown RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 UBXN2BQ14CS0 331 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 TRIP4Q15650 581 aaPredicted RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 MLF2Q15773 248 aaPredicted RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 HSDL1Q3SXM5 330 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 TNNI3KQ59H18 835 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 SEPT14Q6ZU15 432 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 C12orf50Q8NA57 414 aaPredicted RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 PLD4Q96BZ4 506 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 UBL7Q96S82 380 aaPredicted RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 RHOBTB2Q9BYZ6 727 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 TUT1Q9H6E5 874 aaKnown RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 MTMR4Q9NYA4 1195 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 KLK13Q9UKR3 277 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 IRAK3Q9Y616 596 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 FPGT-TNNI3KV9GXZ4 949 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 SPTAN1Q13813 2472 aaKnown RBP3.84□□□□□ -1.79
PMS1-215ENST00000447232 SHROOM3Q8TF72 1996 aa3.84□□□□□ -1.79
PMS1-215ENST00000447232 SCO2A0A1W2PP80 73 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 SHISA7A6NL88 538 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 B4DLN1 442 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 SRGAP3O43295 1099 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 HYAL3O43820 417 aaPredicted RBP3.84□□□□□ -1.8
PMS1-215ENST00000447232 PSAPP07602 524 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 PDE6AP16499 860 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 BRD2P25440 801 aaKnown RBP3.84□□□□□ -1.8
PMS1-215ENST00000447232 CD52P31358 61 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 CNR2P34972 360 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 SOX18P35713 384 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 MRPL12P52815 198 aaKnown RBP3.84□□□□□ -1.8
PMS1-215ENST00000447232 GPC5P78333 572 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 WTAPQ15007 396 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 ZBTB41Q5SVQ8 909 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 SPOUT1Q5T280 376 aaKnown RBP3.84□□□□□ -1.8
PMS1-215ENST00000447232 C16orf46Q6P387 395 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 RNF207Q6ZRF8 634 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 CABP7Q86V35 215 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 GLG1Q92896 1179 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 CEP95Q96GE4 821 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 USP26Q9BXU7 913 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 RANBP17Q9H2T7 1088 aaKnown RBP3.84□□□□□ -1.8
PMS1-215ENST00000447232 BCAS3Q9H6U6 928 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 WDR6Q9NNW5 1121 aaKnown RBP3.84□□□□□ -1.8
PMS1-215ENST00000447232 SQORQ9Y6N5 450 aa3.84□□□□□ -1.8
PMS1-215ENST00000447232 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 TBKBP1A7MCY6 615 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 TNFRSF10BO14763 440 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 PAPLNO95428 1278 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms