RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 RWDD2AQ9UIY3 292 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 STYXL1Q9Y6J8 313 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 A0A0B4J269 797 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 BICDL2A1A5D9 508 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 GOLGA8IPA6NC78 632 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 GOLGA8JA6NMD2 632 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 NR3C1P04150 777 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 GARTP22102 1010 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 ZBTB41Q5SVQ8 909 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 SLFN12LQ6IEE8 588 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 C16orf59Q7L2K0 433 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 THNSL1Q8IYQ7 743 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 CEP120Q8N960 986 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 GOLGA5Q8TBA6 731 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 LBHD1Q9BQE6 289 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 HSPBP1Q9NZL4 362 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 AGO2Q9UKV8 859 aaKnown RBP19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 PDCD11Q14690 1871 aaKnown RBP19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 RALGAPA2Q2PPJ7 1873 aa19.65■□□□□ 0.74
TRAPPC4-203ENST00000447216 MCF2P10911 925 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 ERCC5P28715 1186 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 OSTNP61366 133 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 SNRPFP62306 86 aaKnown RBP19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 LRRC63Q05C16 580 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 DCAF4L1Q3SXM0 396 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 TMEM192Q8IY95 271 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 APOL6Q9BWW8 343 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 FTHL17Q9BXU8 183 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 TRIM6Q9C030 488 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 TSPYL2Q9H2G4 693 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 NXF3Q9H4D5 531 aaKnown RBP19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 RGS18Q9NS28 235 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 FAM105AQ9NUU6 356 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 DMAC2Q9NW81 257 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 CGNQ9P2M7 1197 aaKnown RBP19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 HES2Q9Y543 173 aa19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 TNRC18O15417 2968 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC4-203ENST00000447216 ENPP3O14638 875 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 OGTO15294 1046 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 NR2F2P24468 414 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 CASP4P49662 377 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 RGS19P49795 217 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 IKBKEQ14164 716 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 EDRF1Q3B7T1 1238 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 CT47A1Q5JQC4 288 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 ZNF365Q70YC5 407 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 C12orf56Q8IXR9 622 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 AOPEPQ8N6M6 819 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 SMG8Q8ND04 991 aaKnown RBP19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 IPPQ9Y573 584 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 PCDHB2Q9Y5E7 798 aa19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 TDRD15B5MCY1 1934 aaKnown RBP19.63■□□□□ 0.73
TRAPPC4-203ENST00000447216 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 C9IYK1 514 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 FAM189A1O60320 539 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 PFKMP08237 780 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 TNFSF9P41273 254 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 MAGEA10P43363 369 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 ACOT2P49753 483 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 ZNF165P49910 485 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 ADAM9Q13443 819 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 NFIL3Q16649 462 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 TMEM240Q5SV17 173 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 CEP135Q66GS9 1140 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 LRRC55Q6ZSA7 311 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 OTOP2Q7RTS6 562 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 APBB1IPQ7Z5R6 666 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 ECHDC2Q86YB7 292 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 SLC9A9Q8IVB4 645 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 CSGALNACT2Q8N6G5 542 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 XXYLT1Q8NBI6 393 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 RDH13Q8NBN7 331 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 RNF169Q8NCN4 708 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 LPPQ93052 612 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 FAM213AQ9BRX8 229 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 SRRTQ9BXP5 876 aaKnown RBP19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 NAT10Q9H0A0 1025 aaKnown RBP19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 RNF39Q9H2S5 420 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 CBX8Q9HC52 389 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 SNTG2Q9NY99 539 aa19.62■□□□□ 0.73
TRAPPC4-203ENST00000447216 FNDC1Q4ZHG4 1894 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 MEIS3P2A8K0S8 358 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 CETN3O15182 167 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 EXOC3O60645 756 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 FGBP02675 491 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 ADRB2P07550 413 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 STAG3L1P0CL83 205 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 ATF7P17544 494 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 FKBP3Q00688 224 aaKnown RBP19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 TPD52L1Q16890 204 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 CRELD2Q6UXH1 353 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 SLC24A5Q71RS6 500 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 CBWD2Q8IUF1 395 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 ZC3H3Q8IXZ2 948 aaKnown RBP19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 GPD1LQ8N335 351 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 ENOX1Q8TC92 643 aaKnown RBP19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.61■□□□□ 0.739e-6■□□□□ 9.3
TRAPPC4-203ENST00000447216 C1orf112Q9NSG2 853 aa19.61■□□□□ 0.73
TRAPPC4-203ENST00000447216 A0A0U1RQF3 1178 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms