RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 VSNL1P62760 191 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 S100A12P80511 92 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 FOXK1P85037 733 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 KIF23Q02241 960 aaPredicted RBP9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 SMAD4Q13485 552 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 SPRED3Q2MJR0 410 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 LRRC8BQ6P9F7 803 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 TRPM8Q7Z2W7 1104 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 RALYLQ86SE5 291 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 CROCCP3Q8IVE0 287 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 CCNYL1Q8N7R7 359 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 LILRB4Q8NHJ6 448 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 CEP70Q8NHQ1 597 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 COG1Q8WTW3 980 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 HSPH1Q92598 858 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 TEX13BQ9BXU2 312 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 EDEM3Q9BZQ6 932 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 YTHDC2Q9H6S0 1430 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 NGRNQ9NPE2 291 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 TEKT2Q9UIF3 430 aa9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 TDRKHQ9Y2W6 561 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-203ENST00000447025 GCC2Q8IWJ2 1684 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 KPNA5O15131 536 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 STX10O60499 249 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 EGFRP00533 1210 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 TFPTP0C1Z6 253 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 POU2F1P14859 743 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 PHBP35232 272 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 ZNF135P52742 658 aaPredicted RBP9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 ENPEPQ07075 957 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 CSTF3Q12996 717 aaKnown RBP9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 ZCWPW2Q504Y3 356 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 ODF2Q5BJF6 829 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 ELMOD1Q8N336 334 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 IPMKQ8NFU5 416 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 OTUD7AQ8TE49 926 aaPredicted RBP9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 ANKS1AQ92625 1134 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 CCDC138Q96M89 665 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 VPS35Q96QK1 796 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 PIP5K1AQ99755 562 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 SELENOOQ9BVL4 669 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 GHITMQ9H3K2 345 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 SLC38A10Q9HBR0 1119 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 CYP4F12Q9HCS2 524 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 ASNSD1Q9NWL6 643 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 MRPL39Q9NYK5 338 aaKnown RBP9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 SENP1Q9P0U3 644 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 TAGLN3Q9UI15 199 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 FAF1Q9UNN5 650 aaPredicted RBP9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 PCDHGA8Q9Y5G5 932 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.93
MCF2L2-203ENST00000447025 NUP155O75694 1391 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 SYNJ2BP-COX16A0A087WUM0 186 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 TYW5A2RUC4 315 aaKnown RBP9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 H3BQV1 296 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 AGPSO00116 658 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 MAPK13O15264 365 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 KRT18P05783 430 aaKnown RBP9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 VCLP18206 1134 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 CACNA2D1P54289 1103 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 GPR85P60893 370 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 KRT76Q01546 638 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 TAGLNQ01995 201 aaKnown RBP9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 GUCY2DQ02846 1103 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 CHRNEQ04844 493 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 TYRO3Q06418 890 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 CBLBQ13191 982 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 CCNG2Q16589 344 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 NFE2Q16621 373 aaPredicted RBP9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 SPOPLQ6IQ16 392 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 OLFM4Q6UX06 510 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 LONP2Q86WA8 852 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 CPSF7Q8N684 471 aaKnown RBP9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 PIP4K2CQ8TBX8 421 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 TTC17Q96AE7 1141 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 ZNF274Q96GC6 653 aaPredicted RBP9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 OLFM3Q96PB7 478 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 C7orf25Q9BPX7 421 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 CENPKQ9BS16 269 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 ZPBPQ9BS86 351 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 RUBCNLQ9H714 662 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 PAQR5Q9NXK6 330 aaPredicted RBP9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 PRKAG2Q9UGJ0 569 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 SNCAIPQ9Y6H5 919 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 ZNF804BA4D1E1 1349 aa9.21□□□□□ -0.94
MCF2L2-203ENST00000447025 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 C1orf232A0A0U1RR37 186 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 XPO1O14980 1071 aaKnown RBP9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 CUTAO60888 179 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 USP2O75604 605 aaPredicted RBP9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 KRT75O95678 551 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 GNAZP19086 355 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 TNFAIP3P21580 790 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 PFKPQ01813 784 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 TRIM32Q13049 653 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 TTLL12Q14166 644 aaPredicted RBP9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 KLHL35Q6PF15 583 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 KDELC1Q6UW63 502 aa9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 USP50Q70EL3 339 aaPredicted RBP9.2□□□□□ -0.94
MCF2L2-203ENST00000447025 USP43Q70EL4 1123 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms