RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 GSTCDQ8NEC7 633 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 RABGGTAQ92696 567 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 ACSF2Q96CM8 615 aaPredicted RBP17.13■□□□□ 0.33
SEC13-213ENST00000445064 B3GALT6Q96L58 329 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 COLEC11Q9BWP8 271 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 MAN1C1Q9NR34 630 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 PARP2Q9UGN5 583 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 CCDC195A0A1B0GUA6 201 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 LRRIQ4A6NIV6 560 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 H0Y858 1186 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 MED24O75448 989 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 SEC24BO95487 1268 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 ADH1AP07327 375 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 SPATA31D3P0C874 917 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 C15orf39Q6ZRI6 1047 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 SPATA31D4Q6ZUB0 917 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 CCDC149Q6ZUS6 474 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 OTOP3Q7RTS5 596 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 PALB2Q86YC2 1186 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 HACE1Q8IYU2 909 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 GPR62Q9BZJ7 368 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 RXFP1Q9HBX9 757 aa17.12■□□□□ 0.33
SEC13-213ENST00000445064 DSG1Q02413 1049 aa17.11■□□□□ 0.33
SEC13-213ENST00000445064 ZNF174Q15697 407 aa17.11■□□□□ 0.33
SEC13-213ENST00000445064 TMEM105Q8N8V8 129 aa17.11■□□□□ 0.33
SEC13-213ENST00000445064 ATOH1Q92858 354 aaPredicted RBP17.11■□□□□ 0.33
SEC13-213ENST00000445064 TUFT1Q9NNX1 390 aa17.11■□□□□ 0.33
SEC13-213ENST00000445064 CHST7Q9NS84 486 aa17.11■□□□□ 0.33
SEC13-213ENST00000445064 CACNG4Q9UBN1 327 aa17.11■□□□□ 0.33
SEC13-213ENST00000445064 TDRD15B5MCY1 1934 aaKnown RBP17.11■□□□□ 0.33
SEC13-213ENST00000445064 TTLL13PA6NNM8 815 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 RFPL2O75678 378 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 GLUD1P00367 558 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
SEC13-213ENST00000445064 FUT10Q6P4F1 479 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 GLYCTKQ8IVS8 523 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 NACC1Q96RE7 527 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 MFSD1Q9H3U5 465 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 PRMT7Q9NVM4 692 aaPredicted RBP17.1■□□□□ 0.33
SEC13-213ENST00000445064 USP20Q9Y2K6 914 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 PLXNA3P51805 1871 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 DENND4AQ7Z401 1863 aa17.1■□□□□ 0.33
SEC13-213ENST00000445064 C2orf16Q68DN1 1984 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 GALR2O43603 387 aaPredicted RBP17.09■□□□□ 0.33
SEC13-213ENST00000445064 N4BP1O75113 896 aaKnown RBP17.09■□□□□ 0.33
SEC13-213ENST00000445064 TADA2AO75478 443 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 TDGQ13569 410 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 USP41Q3LFD5 358 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 ASTLQ6HA08 431 aaPredicted RBP17.09■□□□□ 0.33
SEC13-213ENST00000445064 POTEGQ6S5H5 508 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 CCDC83Q8IWF9 413 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 MCPH1Q8NEM0 835 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 CMASQ8NFW8 434 aaPredicted RBP17.09■□□□□ 0.33
SEC13-213ENST00000445064 PAAF1Q9BRP4 392 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 POLR3CQ9BUI4 534 aaPredicted RBP17.09■□□□□ 0.33
SEC13-213ENST00000445064 IRF2BPLQ9H1B7 796 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 FZD8Q9H461 694 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 KCNK12Q9HB15 430 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 DPP7Q9UHL4 492 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 ADAM28Q9UKQ2 775 aa17.09■□□□□ 0.33
SEC13-213ENST00000445064 RPL17P18621 184 aaKnown RBP17.08■□□□□ 0.32
SEC13-213ENST00000445064 GBP2P32456 591 aaPredicted RBP17.08■□□□□ 0.32
SEC13-213ENST00000445064 NUBP1P53384 320 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 GRIK3Q13003 919 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 PADI6Q6TGC4 694 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 RSAD2Q8WXG1 361 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 RIN2Q8WYP3 895 aaPredicted RBP17.08■□□□□ 0.32
SEC13-213ENST00000445064 BSNDQ8WZ55 320 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 SMG7Q92540 1137 aaKnown RBP17.08■□□□□ 0.32
SEC13-213ENST00000445064 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 CXCL16Q9H2A7 254 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 WDR6Q9NNW5 1121 aaKnown RBP17.08■□□□□ 0.32
SEC13-213ENST00000445064 SNTG2Q9NY99 539 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.32
SEC13-213ENST00000445064 TGM5O43548 720 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 OR52Z1P0C646 297 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 LIG1P18858 919 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 CYP11B2P19099 503 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 RPA1P27694 616 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 FAM187BQ17R55 369 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 CDCA2Q69YH5 1023 aaPredicted RBP17.07■□□□□ 0.32
SEC13-213ENST00000445064 LILRA6Q6PI73 481 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 ELMSAN1Q6PJG2 1045 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
SEC13-213ENST00000445064 CYP26C1Q6V0L0 522 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 NOSTRINQ8IVI9 506 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 FLCNQ8NFG4 579 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 ERMNQ8TAM6 284 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 HASPINQ8TF76 798 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 HDAC7Q8WUI4 952 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 ZNF707Q96C28 371 aaPredicted RBP17.07■□□□□ 0.32
SEC13-213ENST00000445064 NT5C3AQ9H0P0 336 aa17.07■□□□□ 0.32
SEC13-213ENST00000445064 PDZD7Q9H5P4 517 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms