RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.16■□□□□ 0.02
MCF2L-218ENST00000442625 PCDHA3Q9Y5H8 950 aa15.16■□□□□ 0.02
MCF2L-218ENST00000442625 FAM187AA6NFU0 413 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 G3V3G9 751 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 TBX3O15119 743 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 SLITRK3O94933 977 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 NDUFB10O96000 172 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 AGTP01019 485 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 CALCAP01258 141 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 DLATP10515 647 aaKnown RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 PAX3P23760 479 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 CD151P48509 253 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 RNASELQ05823 741 aaKnown RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 CRYMQ14894 314 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 DCAF8Q5TAQ9 597 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 PHLDB2Q86SQ0 1253 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 FITM2Q8N6M3 262 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 ZSWIM2Q8NEG5 633 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 KLHL29Q96CT2 875 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 RSRC1Q96IZ7 334 aaKnown RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 FAM118BQ9BPY3 351 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 FAM167BQ9BTA0 163 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 MAF1Q9H063 256 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 EBF2Q9HAK2 575 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 OLFML3Q9NRN5 406 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 WRAP73Q9P2S5 460 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 GTPBP10A4D1E9 387 aaKnown RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 PEX19P40855 299 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 CCNHP51946 323 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 JAG1P78504 1218 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 C1orf186Q6ZWK4 172 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 PRUNE1Q86TP1 453 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 ARHGEF19Q8IW93 802 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 ARHGEF2Q92974 986 aaKnown RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 L3MBTL3Q96JM7 780 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 CCDC17Q96LX7 622 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 DBNDD1Q9H9R9 158 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 PARVGQ9HBI0 331 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 UBE2TQ9NPD8 197 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-218ENST00000442625 RASAL2Q9UJF2 1139 aa15.15■□□□□ 0.02
MCF2L-218ENST00000442625 CFBP00751 764 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 ANXA13P27216 316 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 CRKP46108 304 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 MYL7Q01449 175 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 ADCY2Q08462 1091 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 DHX34Q14147 1143 aaKnown RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 VPS72Q15906 364 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 SH3BP5LQ7L8J4 393 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 COL23A1Q86Y22 540 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 CYP4X1Q8N118 509 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 ATG4AQ8WYN0 398 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 TRIM6Q9C030 488 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 CDC42EP4Q9H3Q1 356 aaKnown RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 AGPAT3Q9NRZ7 376 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 APEX2Q9UBZ4 518 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 USP15Q9Y4E8 981 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 SLC26A4O43511 780 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 NEFHP12036 1026 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 FOXD4Q12950 439 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 ODR4Q5SWX8 454 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 SYDE2Q5VT97 1194 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 VSTM1Q6UX27 236 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 BZW1Q7L1Q6 419 aaKnown RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 FAM178BQ8IXR5 827 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 RPUSD2Q8IZ73 545 aaKnown RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 AGPAT1Q99943 283 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 HSD17B14Q9BPX1 270 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 POLR3CQ9BUI4 534 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 MTRF1LQ9UGC7 380 aaKnown RBP15.14■□□□□ 0.01
MCF2L-218ENST00000442625 FRMD4BQ9Y2L6 1034 aa15.14■□□□□ 0.01
MCF2L-218ENST00000442625 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 ANKRD62A6NC57 917 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 EXOC3O60645 756 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 GSTA1P08263 222 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 MGAT5Q09328 741 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 SPDL1Q96EA4 605 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 FIZ1Q96SL8 496 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 PCDHB18PQ96TA0 734 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 NAP1L3Q99457 506 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-218ENST00000442625 ZSWIM1Q9BR11 485 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 AAASQ9NRG9 546 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 NYAP2Q9P242 653 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 SMCHD1A6NHR9 2005 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 IGLV3-22A0A075B6J6 115 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 ZNF268Q14587 947 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-218ENST00000442625 KYNUQ16719 465 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 DAB2IPQ5VWQ8 1189 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 FAM47EQ6ZV65 393 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 OTOP1Q7RTM1 612 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 ZNF720Q7Z2F6 126 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 APBB1IPQ7Z5R6 666 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-218ENST00000442625 SYCP3Q8IZU3 236 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 ADAM33Q9BZ11 813 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 FAM198AQ9UFP1 575 aa15.13■□□□□ 0.01
MCF2L-218ENST00000442625 CLDN3O15551 220 aa15.12■□□□□ 0.01
MCF2L-218ENST00000442625 SGPL1O95470 568 aa15.12■□□□□ 0.01
MCF2L-218ENST00000442625 MYBL1P10243 752 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms