RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MXD4Q14582 209 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 WHAMMP3Q1A5X7 153 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 CNKSR3Q6P9H4 555 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 FOXR2Q6PJQ5 311 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 CYP26C1Q6V0L0 522 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 FAM178BQ8IXR5 827 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 NME8Q8N427 588 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 KIAA0895Q8NCT3 520 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 C7orf25Q9BPX7 421 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 FDXACB1Q9BRP7 624 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 DNAI2Q9GZS0 605 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 LACRTQ9GZZ8 138 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 NKX2-4Q9H2Z4 354 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 LZTFL1Q9NQ48 299 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 TBC1D7Q9P0N9 293 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 TFR2Q9UP52 801 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 CEP350Q5VT06 3117 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 GRXCR1A8MXD5 290 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 HNRNPDLO14979 420 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 TBX3O15119 743 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 IQCF3P0C7M6 154 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 MYBP10242 640 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 CKBP12277 381 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 SKIP12755 728 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 ITGA4P13612 1032 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 FGFR4P22455 802 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 DNAJB2P25686 324 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 RFC2P35250 354 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 PLPPR4Q7Z2D5 763 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZC3H3Q8IXZ2 948 aaKnown RBP8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 PLCD3Q8N3E9 789 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 ERGIC2Q96RQ1 377 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 VIPAS39Q9H9C1 493 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 EXOC7Q9UPT5 735 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 INSL6Q9Y581 213 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 K7ENM7 598 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 C2CD2LO14523 706 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 SHOX2O60902 331 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 F2P00734 622 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 MYBL2P10244 700 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 EEF1GP26641 437 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 KLK7P49862 253 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 GYS2P54840 703 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 EMC2Q15006 297 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 POTEGQ6S5H5 508 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 POTEEQ6S8J3 1075 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 USP38Q8NB14 1042 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 KLHDC9Q8NEP7 349 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 OLIG1Q8TAK6 271 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 SLC9A7Q96T83 725 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 PYM1Q9BRP8 204 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 NOC4LQ9BVI4 516 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 C2orf40Q9H1Z8 148 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 TOPORSQ9NS56 1045 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 FAM50BQ9Y247 325 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 LAD1O00515 517 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 XPOTO43592 962 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 KRT19P08727 400 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 RFC5P40937 340 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 NDUFV1P49821 464 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 CACNB1Q02641 598 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 PRPF4BQ13523 1007 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 CCDC62Q6P9F0 684 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 GLYCTKQ8IVS8 523 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 CEP112Q8N8E3 955 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 FBXO22Q8NEZ5 403 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 MTMR8Q96EF0 704 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 SEMA6BQ9H3T3 888 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 ARFGAP3Q9NP61 516 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 CYP26B1Q9NR63 512 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 BLOC1S4Q9NUP1 217 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 AGPAT5Q9NUQ2 364 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 TAB2Q9NYJ8 693 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 GSTTP1A0A1W2PQM5 241 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 SFI1A8K8P3 1242 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 EPHB6O15197 1021 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 TADA2AO75478 443 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 GCNT3O95395 438 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 ATP1A1P05023 1023 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 KCNA2P16389 499 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 EIF4BP23588 611 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 EDNRBP24530 442 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 TUBB4BP68371 445 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 SP2Q02086 613 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 CENPPQ6IPU0 288 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZNF771Q7L3S4 317 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 CDR2LQ86X02 465 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 FAM126BQ8IXS8 530 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 PRPF31Q8WWY3 499 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 APBB2Q92870 758 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 FNBP1Q96RU3 617 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 MMS19Q96T76 1030 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 BCAS3Q9H6U6 928 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 EXOC1Q9NV70 894 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 LCMT1Q9UIC8 334 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 PADI3Q9ULW8 664 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 ST3GAL5Q9UNP4 418 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 EPN1Q9Y6I3 576 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 DOCK3Q8IZD9 2030 aa8.01□□□□□ -1.13
CDC42BPA-208ENST00000442054 NFASCO94856 1347 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms