RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 IDUAP35475 653 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 VPS41P49754 854 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 GPC3P51654 580 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 AFF3P51826 1226 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 NR1H2P55055 460 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 HDAC4P56524 1084 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 GSCP56915 257 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 IFI35P80217 286 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 FOXK2Q01167 660 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CTBSQ01459 385 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 TNP2Q05952 138 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 GALNT1Q10472 559 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 SEMA5AQ13591 1074 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CUL2Q13617 745 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 MXD4Q14582 209 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 SART3Q15020 963 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 SEZ6Q53EL9 994 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 FAM26DQ5JW98 314 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ZMYM1Q5SVZ6 1142 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 FAM182BQ5T319 152 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 SAMD5Q5TGI4 173 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 HGSNATQ68CP4 663 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 IQSEC1Q6DN90 963 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 IYDQ6PHW0 289 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ATF7IPQ6VMQ6 1270 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ZNF783Q6ZMS7 281 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 BNIPLQ7Z465 357 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 PTRH1Q86Y79 214 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 FAM9CQ8IZT9 166 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CRACR2BQ8N4Y2 399 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 C2orf69Q8N8R5 385 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ZBTB8BQ8NAP8 495 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 RBBP8NLQ8NC74 664 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ANKRD20A12PQ8NF67 263 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 RFWD2Q8NHY2 731 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CCDC26Q8TAB7 109 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 GDAP1Q8TB36 358 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ZDHHC1Q8WTX9 485 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 TRAPPC12Q8WVT3 735 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 KRT35Q92764 455 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CDKL2Q92772 493 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 EXOC4Q96A65 974 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CCDC74AQ96AQ1 378 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ARL8AQ96BM9 186 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 DHX58Q96C10 678 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 TUBGCP3Q96CW5 907 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 LTV1Q96GA3 475 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 FAXDC2Q96IV6 333 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CABS1Q96KC9 395 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 PPP1R13BQ96KQ4 1090 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 RHOVQ96L33 236 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 SAMD11Q96NU1 681 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ACAP3Q96P50 834 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CATSPER2Q96P56 530 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 TMEM120AQ9BXJ8 343 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 NACAP1Q9BZK3 213 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 PHACTR1Q9C0D0 580 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 TRPV6Q9H1D0 765 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 SYNCQ9H7C4 482 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 FAM204AQ9H8W3 233 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 PDE11AQ9HCR9 933 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 HPS4Q9NQG7 708 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 USP40Q9NVE5 1235 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 ADPRHL2Q9NX46 363 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 MALT1Q9UDY8 824 aa4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 APOBEC2Q9Y235 224 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CHTOPQ9Y3Y2 248 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-209ENST00000441871 CNTNAP5Q8WYK1 1306 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 PI4KAP2A4QPH2 592 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 RGSL1A5PLK6 1076 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 ZSCAN5CA6NGD5 496 aaPredicted RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 K7ESF4 209 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 KERAO60938 352 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 SOAT2O75908 522 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 KCNH1O95259 989 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 SLU7O95391 586 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 PF4P02776 101 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 ATP5BP06576 529 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 DLATP10515 647 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 CSF2RAP15509 400 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 ZNF3P17036 446 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 TNFSF4P23510 183 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 YY1P25490 414 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 DNAJB1P25685 340 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 GDI1P31150 447 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 HOXD13P35453 343 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 PRIM2P49643 509 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 HNMTP50135 292 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 EPHA4P54764 986 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 BASP1P80723 227 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 NRG1Q02297 640 aaPredicted RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 GABPB1Q06547 395 aaPredicted RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 GRSF1Q12849 480 aaKnown RBP eCLIP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 CUL4BQ13620 913 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 AUHQ13825 339 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 LRP8Q14114 963 aa4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 UBAP2LQ14157 1087 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 FRG1Q14331 258 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 ZNF267Q14586 743 aaPredicted RBP4.28□□□□□ -1.72
R3HDM1-209ENST00000441871 IQCB1Q15051 598 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms