RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ERP27Q96DN0 273 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 ZSWIM1Q9BR11 485 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 MOV10L1Q9BXT6 1211 aaKnown RBP21.74■■□□□ 1.07
SHOX2-203ENST00000441443 PIDD1Q9HB75 910 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 PITPNM2Q9BZ72 1349 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 COL24A1Q17RW2 1714 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 SEL1L2Q5TEA6 688 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 ZNF746Q6NUN9 644 aaPredicted RBP21.74■■□□□ 1.07
SHOX2-203ENST00000441443 KIAA0825Q8IV33 1275 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 SRRM1Q8IYB3 904 aaKnown RBP21.74■■□□□ 1.07
SHOX2-203ENST00000441443 PIGOQ8TEQ8 1089 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 SERPINB12Q96P63 405 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 PITPNM3Q9BZ71 974 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 MTMR4Q9NYA4 1195 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 LRRC42Q9Y546 428 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 SPATA31A6Q5VVP1 1343 aa21.74■■□□□ 1.07
SHOX2-203ENST00000441443 FESP07332 822 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 ALAS1P13196 640 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 RWDD2BP57060 319 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 NFIAQ12857 509 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 SHROOM1Q2M3G4 852 aaPredicted RBP21.73■■□□□ 1.07
SHOX2-203ENST00000441443 CBWD6Q4V339 395 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 CBWD3Q5JTY5 395 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 CBWD5Q5RIA9 395 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 INTS8Q75QN2 995 aaKnown RBP21.73■■□□□ 1.07
SHOX2-203ENST00000441443 PWWP2AQ96N64 755 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 SYT15Q9BQS2 421 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 JMJD4Q9H9V9 463 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 ATMINO43313 823 aaPredicted RBP21.73■■□□□ 1.07
SHOX2-203ENST00000441443 TRIM49P0CI25 452 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 TRIM49CP0CI26 452 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 FOXN2P32314 431 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 RNF43Q68DV7 783 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 FAM186BQ8IYM0 893 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 TEX9Q8N6V9 391 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 NUDCD1Q96RS6 583 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 RUSC1Q9BVN2 902 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 PAPOLBQ9NRJ5 636 aaKnown RBP21.73■■□□□ 1.07
SHOX2-203ENST00000441443 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
SHOX2-203ENST00000441443 FTLP02792 175 aaPredicted RBP21.72■■□□□ 1.07
SHOX2-203ENST00000441443 TPBGLP0DKB5 382 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 NT5C2P49902 561 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 C15orf52Q6ZUT6 534 aaKnown RBP21.72■■□□□ 1.07
SHOX2-203ENST00000441443 TRMT10CQ7L0Y3 403 aaKnown RBP21.72■■□□□ 1.07
SHOX2-203ENST00000441443 ADGRF4Q8IZF3 695 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 BTBD6Q96KE9 485 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 CPSF2Q9P2I0 782 aaKnown RBP21.72■■□□□ 1.07
SHOX2-203ENST00000441443 KIF13BQ9NQT8 1826 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 LRRD1A4D1F6 860 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 ANKRD33BA6NCL7 494 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 hCG_1984214I3L0E3 225 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 WFS1O76024 890 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 CLK2P49760 499 aaKnown RBP21.72■■□□□ 1.07
SHOX2-203ENST00000441443 PAPOLAP51003 745 aaKnown RBP21.72■■□□□ 1.07
SHOX2-203ENST00000441443 CYP4A11Q02928 519 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 MTFR1Q15390 333 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 TRIP13Q15645 432 aaPredicted RBP21.72■■□□□ 1.07
SHOX2-203ENST00000441443 ZNF449Q6P9G9 518 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 ZNF713Q8N859 430 aaPredicted RBP21.72■■□□□ 1.07
SHOX2-203ENST00000441443 FAM13CQ8NE31 585 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 PSTPIP2Q9H939 334 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 SERPINB13Q9UIV8 391 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 TP73O15350 636 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 AHCYL1O43865 530 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 CETPP11597 493 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 HSPA6P17066 643 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 POLD1P28340 1107 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 FMO5P49326 533 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 RAB27AP51159 221 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 COG2Q14746 738 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 CLUL1Q15846 466 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 STK32AQ8WU08 396 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 C1orf54Q8WWF1 131 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 TXLNGQ9NUQ3 528 aa21.72■■□□□ 1.07
SHOX2-203ENST00000441443 FOXN3O00409 490 aaPredicted RBP21.71■■□□□ 1.07
SHOX2-203ENST00000441443 TTLL1O95922 423 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 TAC1P20366 129 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 ZFPM1Q8IX07 1006 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 LMNTD2Q8IXW0 634 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 SUPT20HQ8NEM7 779 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 TTC8Q8TAM2 541 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 CYP39A1Q9NYL5 469 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 DNM3Q9UQ16 869 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 MIF4GDA9UHW6 222 aaKnown RBP21.71■■□□□ 1.07
SHOX2-203ENST00000441443 TGFB1I1O43294 461 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 DLATP10515 647 aaKnown RBP21.71■■□□□ 1.07
SHOX2-203ENST00000441443 SKIV2L2P42285 1042 aaKnown RBP21.71■■□□□ 1.07
SHOX2-203ENST00000441443 PEX5P50542 639 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 ZNF568Q3ZCX4 644 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 SPOCK2Q92563 424 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 MAGEB18Q96M61 343 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 ASIC3Q9UHC3 531 aa21.71■■□□□ 1.07
SHOX2-203ENST00000441443 GTPBP10A4D1E9 387 aaKnown RBP21.7■■□□□ 1.06
SHOX2-203ENST00000441443 SLC16A3O15427 465 aaKnown RBP21.7■■□□□ 1.06
SHOX2-203ENST00000441443 ECEL1O95672 775 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 ATP5DP30049 168 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 MIGA2Q7L4E1 593 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 CYFIP1Q7L576 1253 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 KRT27Q7Z3Y8 459 aa21.7■■□□□ 1.06
SHOX2-203ENST00000441443 SLC13A5Q86YT5 568 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms