RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ZNF576Q9H609 170 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 LUC7LQ9NQ29 371 aaKnown RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 FHOD1Q9Y613 1164 aa5.19□□□□□ -1.58
EDEM3-203ENST00000439962 EPN1Q9Y6I3 576 aaPredicted RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 MYH9P35579 1960 aaKnown RBP5.19□□□□□ -1.58
EDEM3-203ENST00000439962 SCN10AQ9Y5Y9 1956 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 A0A087WZ62 844 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SSU72P8A0A1W2PR75 194 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CCDC66A2RUB6 948 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 NT5C1B-RDH14C9J2C7 533 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 KPNA6O60684 536 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PSMD10O75832 226 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PLCG1P19174 1290 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 YWHABP31946 246 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 KRT9P35527 623 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ARHGAP25P42331 645 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 AMPD2Q01433 879 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 UBXN1Q04323 297 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MAPK8IP2Q13387 824 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 IKBKEQ14164 716 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 KARSQ15046 597 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 NFIL3Q16649 462 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MAP9Q49MG5 647 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 FAM102BQ5T8I3 360 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SMYD5Q6GMV2 418 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CC2D1AQ6P1N0 951 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ANO5Q75V66 913 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 RBM23Q86U06 439 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SERINC5Q86VE9 423 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 RPUSD2Q8IZ73 545 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CSGALNACT2Q8N6G5 542 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ETNPPLQ8TBG4 499 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 RAD54LQ92698 747 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 LPPQ93052 612 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CALR3Q96L12 384 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 DUSP9Q99956 384 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 EIF2AK1Q9BQI3 630 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 FDXACB1Q9BRP7 624 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 TUBGCP2Q9BSJ2 902 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CARD6Q9BX69 1037 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MRPL44Q9H9J2 332 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PADI3Q9ULW8 664 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 HES2Q9Y543 173 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 UBE4BO95155 1302 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ZNF236Q9UL36 1845 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 LRRIQ4A6NIV6 560 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SOWAHDA6NJG2 315 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 INO80B-WBP1J3KQ70 363 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MAP2K7O14733 419 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MAFGO15525 162 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PJA2O43164 708 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 RPS6KA5O75582 802 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 OATP04181 439 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 FGFR1P11362 822 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 FOSL2P15408 326 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CCT6AP40227 531 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 OSTNP61366 133 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PAK2Q13177 524 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 TERF2Q15554 542 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CLUL1Q15846 466 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 EDRF1Q3B7T1 1238 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 C10orf76Q5T2E6 689 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 KRT79Q5XKE5 535 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 KLHL10Q6JEL2 608 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 RSPH3Q86UC2 560 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 KIAA0319LQ8IZA0 1049 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 RNF10Q8N5U6 811 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 SLC43A3Q8NBI5 491 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ATP8B4Q8TF62 1192 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CRYGNQ8WXF5 182 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 LARP4BQ92615 738 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 VWCEQ96DN2 955 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CPB2Q96IY4 423 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 WDR24Q96S15 920 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ADAM2Q99965 735 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 INO80BQ9C086 356 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CACNG4Q9UBN1 327 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PLAGL2Q9UPG8 496 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 KIAA1024Q9UPX6 916 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 NOC2LQ9Y3T9 749 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 NPHP3-ACAD11A0A0J9YXS1 232 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 FRMD3A2A2Y4 597 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CTAGE15A4D2H0 777 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MEIS3P2A8K0S8 358 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 BTNL10A8MVZ5 291 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 E9PMD0 336 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 HAS3O00219 553 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CES2O00748 559 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 MED24O75448 989 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 CTAGE8P0CG41 777 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ACTN1P12814 892 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 QARSP47897 775 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 WDR5P61964 334 aaKnown RBP5.18□□□□□ -1.58
EDEM3-203ENST00000439962 GHRHRQ02643 423 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 PTK7Q13308 1070 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 ECM1Q16610 540 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 IER5Q5VY09 327 aa5.18□□□□□ -1.58
EDEM3-203ENST00000439962 TWF2Q6IBS0 349 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms