RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 RBM47A0AV96 593 aaKnown RBP12.73□□□□□ -0.37
SMAD3-202ENST00000439724 ZBTB42B2RXF5 422 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 PDE2AO00408 941 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-202ENST00000439724 ZNF185O15231 689 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 STRNO43815 780 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 LRRN2O75325 713 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 ZRANB2O95218 330 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMAD3-202ENST00000439724 LDHAP00338 332 aaKnown RBP12.73□□□□□ -0.37
SMAD3-202ENST00000439724 TNFAIP3P21580 790 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 ADORA2AP29274 412 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 MFAP3P55082 362 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 CDCA2Q69YH5 1023 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-202ENST00000439724 NFRKBQ6P4R8 1299 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 ZPBP2Q6X784 338 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 TRIM50Q86XT4 487 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 FAM71AQ8IYT1 594 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 CAGE1Q8TC20 777 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 HELQQ8TDG4 1101 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 SHC3Q92529 594 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 KREMEN1Q96MU8 473 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 NT5C1BQ96P26 610 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 AGPAT1Q99943 283 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 CCDC113Q9H0I3 377 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 TOPORSQ9NS56 1045 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-202ENST00000439724 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 RNF14Q9UBS8 474 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 ADGRA2Q96PE1 1338 aa12.73□□□□□ -0.37
SMAD3-202ENST00000439724 A0A0B4J269 797 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 ATP8B1O43520 1251 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 NCK2O43639 380 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 HBP1O60381 514 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 TMEM253P0C7T8 217 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 MARK3P27448 753 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 GALCP54803 685 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 ARHGAP1Q07960 439 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 DRP2Q13474 957 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 MXD4Q14582 209 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 CC2D1AQ6P1N0 951 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 LRRC57Q8N9N7 239 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 TAS1R2Q8TE23 839 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 COG1Q8WTW3 980 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 PRPF31Q8WWY3 499 aaKnown RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 COPS5Q92905 334 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 POP1Q99575 1024 aaKnown RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 TARS2Q9BW92 718 aaKnown RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 HAPLN2Q9GZV7 340 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 PDGFCQ9NRA1 345 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 EDN1P05305 212 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 DLATP10515 647 aaKnown RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 NLRP11P59045 1033 aaKnown RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 LAMC2Q13753 1193 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 ZACNQ401N2 412 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 TAPT1Q6NXT6 567 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 CRELD2Q6UXH1 353 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 ENOSF1Q7L5Y1 443 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 PPM1KQ8N3J5 372 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 MMGT1Q8N4V1 131 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 C2orf69Q8N8R5 385 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 TPCN2Q8NHX9 752 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 HNRNPLLQ8WVV9 542 aaKnown RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 RFFLQ8WZ73 363 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 KAT5Q92993 513 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 FNBP1Q96RU3 617 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 PNKPQ96T60 521 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 PARK7Q99497 189 aaKnown RBP12.72□□□□□ -0.37
SMAD3-202ENST00000439724 C2orf40Q9H1Z8 148 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 FAM53CQ9NYF3 392 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 OGFRQ9NZT2 677 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 IVNS1ABPQ9Y6Y0 642 aa12.72□□□□□ -0.37
SMAD3-202ENST00000439724 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.38
SMAD3-202ENST00000439724 CES2O00748 559 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 MSCO60682 206 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 FTCDO95954 541 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 GH1P01241 217 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 RHOXF2BP0C7M4 288 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 GCNT1Q02742 428 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 LAMTOR4Q0VGL1 99 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 PRPF4BQ13523 1007 aaKnown RBP12.71□□□□□ -0.38
SMAD3-202ENST00000439724 WDR93Q6P2C0 686 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 MAMDC4Q6UXC1 1216 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 SLFN11Q7Z7L1 901 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 ZBTB8OSQ8IWT0 167 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 SYCE1Q8N0S2 351 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 EPS8L1Q8TE68 723 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 SLC20A1Q8WUM9 679 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 LMBR1Q8WVP7 490 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 CTNNBL1Q8WYA6 563 aaPredicted RBP12.71□□□□□ -0.38
SMAD3-202ENST00000439724 ZNF516Q92618 1163 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 EMID1Q96A84 441 aaPredicted RBP12.71□□□□□ -0.38
SMAD3-202ENST00000439724 ZBTB45Q96K62 511 aaPredicted RBP12.71□□□□□ -0.38
SMAD3-202ENST00000439724 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 MSTO1Q9BUK6 570 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms